Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0139 ATGTTTCTGCCTCTGTTCCTTCCAGGAGTTTTGCCTTCCAAGGGGGACAACGTTCTTGTTTCTAACATGGAGCTGGAGAGAGTGCTTAGCATGAAAGGTGGCAAAGGAGAAGCTAGCTACGCCAACAATTCCCAAGCACAGGCCATACATGCTAGGTCCGTGCTTCACCTTCTCAAAGAAGCCCTAGACAAAGTTAAGCTCGATAACCCTCATGATATCCCATTTGTGGTTGTGGACTTGGGATGTTCATGTGGAAGCAACACCATCTATATAATGGATGTGATCGTCAAGCACATCATCAAGCGCTATGAGACTTTAGGGTGTGAACCACCTGAGTTTTCTGCTTTCTTCTCTGACCTTCCTGGTAATGACTTCAATACCCTGTTCCAGTTGCTTCCTCCTCTAGCCAACTATGGTGGTGTTAGCATGGAAGAATGCCTTGCTGCCAATAATCACCGGTCCTACTTCGCAGCCGGAGTTCCCGGCTCCTTCTACCGGAGGCTTTTTCCGGCTAGGTCCATCAATTTTTTCCACTCAGCCTTTTCTTTGCATTGGTTATCTCAGTTGCCAGAAACTGTGGTGGACAAGAGGTCAGAAGCATACAACAAAGGGAGGGTGTTTATCCATGGAGCAAGTGAGAGCACAGCAAATGCCTACAAGATGCAATTCCAAGCAGACTTGGCAAGCTTCCTTAGCTCAAGATCAATGGAGATGAAAAAAGGTGGGTCCATGTTCTTGGTTTGCCTAGGTAGGACCCCAGTGGACCCCACAGACCAAGGTGGGGCTGGCCTCCTCTTTGGGACCCACTTTCAAGATGCTTGGGATGATCTTGTCCAAGAGGGACTCATTAGCAGTGAGAAACGAGACAATTTCAACATACCTCTTTATGCGCCGAGCCTGCAGGAGTTCAAGGAGATGGTTGAAGCCGATGGCTCCTTTGCCATAAACAAGCTTGAGGTATTCAAAGGAGGAAGCCCACTTGTGGTGAGTCAGCCAGATGATGCAGCTGAAGTGGGCAAGGCTCTAGCCAACAGCTGCAGGAGTGTGTCAGGAGTCCTTGTTGATGCCCACATTGGTGACAAGCTTAGTGAGGAGCTGTTTCTGAGAGTGGCGCGCAGAGGCATGAGCCATGCCAAAGAACTATTGGAGCAACTACAGTTCTTTCATATAGTTGCAACCCTTTCTTTTACTTAA 1194 0.4841 MFLPLFLPGVLPSKGDNVLVSNMELERVLSMKGGKGEASYANNSQAQAIHARSVLHLLKEALDKVKLDNPHDIPFVVVDLGCSCGSNTIYIMDVIVKHIIKRYETLGCEPPEFSAFFSDLPGNDFNTLFQLLPPLANYGGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSINFFHSAFSLHWLSQLPETVVDKRSEAYNKGRVFIHGASESTANAYKMQFQADLASFLSSRSMEMKKGGSMFLVCLGRTPVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISSEKRDNFNIPLYAPSLQEFKEMVEADGSFAINKLEVFKGGSPLVVSQPDDAAEVGKALANSCRSVSGVLVDAHIGDKLSEELFLRVARRGMSHAKELLEQLQFFHIVATLSFT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0139 397 Pfam SAM dependent carboxyl methyltransferase 61 394 IPR005299 GO:0008168
Glsi08g0139 397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 395 IPR029063 -
Glsi08g0139 397 Gene3D - 28 378 IPR042086 -
Glsi08g0139 397 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 30 377 IPR005299 GO:0008168
Glsi08g0139 397 Gene3D Vaccinia Virus protein VP39 43 324 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0139 Glsi-ChrGlsi08 1258398 1267609 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0139 08 1258398 1267609 Glsi08g0139 08 1258398 1267609 ECH