Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0136 ATGCAAGGCGCAGGGAGAAACAAATGTAGTCTTCCAGGGTCCCACCTCCATCCATTTCCCCCTGCACACTGTGAATGTGATAATCTGTTTCTGTCCTTTGCACCTTCTATTACGCACTCTCTTTCTCTCTCTCTTTCACGAACTCACAGAAACACTGAAGGCCGAGAGCTGCTTAGATCTGAGACCACAGAAACCCCAAGAACCCTTAGCTCAAAGAACGATCTGGGTAAGCATTTTCTCTGTTTCAACAGCTTTTGCGCTTCTTCCCTTACAGAAATGCAGCTCTTCTTCTGTCTGCGTTTTTTCCGCGATCTTGCTCTTGATTCTACTTACTCATTTGCTTCTCGTTGTCTTGATCTGCCATGCCCAGAGATCTAAAACTCATCGAATCGGAAACTTTTTTGGCGTAACCTTCCGGAGAACCTTCGACTCATCATTGCATCTATTGGGCTGGGTAGTTCATGGTTGGGTTGTGCTGGAACTTCAATGGCAGTAACAGATGCTCAAAATCCCCTTCTTGGAGAAATCACCTGTGGTTCCTTGTTAAAGAAACTGCAGGAAATATGGGATGAGGTTGGTGAGAGTGACGAGGAACGAGACAAGATGCTTCTTCAGTTAGAGCAGGAGTGCTTGGATGTGTACAAGAGAAAGGTTGAGCTGGCTGCAAAGTCAAGGGCACAGCTACTTCAAGCCTTGTCTGATGCTAAACTTGAGCTTTCTAGTCTTCTATCAGCCCTTGGAGAAAAAAGCTTTGCTGAAATTCCTGAAAACACTTCTGGAACCATCAAGGAACAGCTTGCTGCTATAGCACCAATCCTTGAACAGCTATGGCAACAAAAGGAGGAGAGAATAAAGGAGTTTTCAGACGTACAGTCACAAATCCAAAAAATATGTGGAGAGATAGCTGGAAATCTGAGCCTTAGCAATCAAGCGGGAACACCTGCAGTTGATGAATCTGACCTGTCCCTAAAGAAGTTAGATGAGTATCAATCTCAGCTCCAAGAACTTCAAAAGGAAAAGAGTGAGAGATTGCACAAGATTCTTGAATTTGTGAGTACTGTTCATGATCTTTGTGCTGTCCTTGGGATGGACTTCTTCAGTACTGTGACTGAGGTTCATCCAAGCTTAAATGATTCTACTGGTGTTCAATCCAAAAGCATAAGCAACGACACCCTAGCTAGGCTTGCTAAGACAGTCTTAACACTGAAAGAAGATAAAAAGCAGAGACTGCACAAGCTCCAAGAATTAGCTTCTCAGTTAATTGATCTGTGGAATTTAATGGATACCACTCTAGAAGAAAGAGAACTGTTCGACCATGTTACCTGTAATATGTCAGCTACTGTAGATGAAGTCACTGTTCCTGGGGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGTAGGATGAAGGAAATTGCTTTCAAGAAGCAAGCAGAACTTGAAGAGATATTTGCCCATGCTCATATAGAAATAGATCCAGAAGCTGCTCGAGAAAAAATCATGGCACTGATTGATTCTGGAAATATTGAACCAGCTGAATTACTGGCTGACATGGACAATCAGATAGTGAAAGCAAAAGAAGAGTCCTTTAGCCGAAAAGATATATTGGATAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGACGAAAACAGGTATAATGCAAGCCGAGGTGCACACTTGAACCTCAAACGTGCGGAGAAAGCTCGTATACTGGTCAACAAAATTCCAGCTTTGGTTGACACATTGGTTGCCAAAACACGTGCATGGGAAGAAGATCATGGCATGTCTTTCACATATGATGGTGTTCCGCTTCTTGCCATGTTAGATGAATATGCTATACTCAGGCATGAACGGGAAGAGGAGAAACGCAGGTTGAGGGACCAGAAGAAGTATCACGAGCAGCAAAACACTGAACAGGAAACCATCTTTGGTTCAAGACCCAGCCCTGCTCGGCCAGTTTCAGTTGGCAACAAGAAGGTGGTAGGCCCTCGTGCTAATGGAGGAGCCAATGGAACTCCTAACCGGCGGCTGTCTCTCAACGCCCATCAAAATGGATCCAGGTCCATAACAAAAGATGGAAAAAGGGATAATACCCGACCAGTTGCTCCTGTGAATTATGTGGCGATATCGAAAGAAGATGCTGCTTCCCATGTTTCTGGTACTGATCCTGTCCCGGCTTCACCCTAA 2250 0.444 MQGAGRNKCSLPGSHLHPFPPAHCECDNLFLSFAPSITHSLSLSLSRTHRNTEGRELLRSETTETPRTLSSKNDLGKHFLCFNSFCASSLTEMQLFFCLRFFRDLALDSTYSFASRCLDLPCPEIXNSSNRKLFWRNLPENLRLIIASIGLGSSWLGCAGTSMAVTDAQNPLLGEITCGSLLKKLQEIWDEVGESDEERDKMLLQLEQECLDVYKRKVELAAKSRAQLLQALSDAKLELSSLLSALGEKSFAEIPENTSGTIKEQLAAIAPILEQLWQQKEERIKEFSDVQSQIQKICGEIAGNLSLSNQAGTPAVDESDLSLKKLDEYQSQLQELQKEKSERLHKILEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTTLEERELFDHVTCNMSATVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQAELEEIFAHAHIEIDPEAAREKIMALIDSGNIEPAELLADMDNQIVKAKEESFSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEDHGMSFTYDGVPLLAMLDEYAILRHEREEEKRRLRDQKKYHEQQNTEQETIFGSRPSPARPVSVGNKKVVGPRANGGANGTPNRRLSLNAHQNGSRSITKDGKRDNTRPVAPVNYVAISKEDAASHVSGTDPVPASP 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0136 749 Gene3D - 533 666 - -
Glsi08g0136 749 Coils Coil 629 656 - -
Glsi08g0136 749 MobiDBLite consensus disorder prediction 644 749 - -
Glsi08g0136 749 Coils Coil 403 423 - -
Glsi08g0136 749 Coils Coil 319 346 - -
Glsi08g0136 749 FunFam 65-kDa microtubule-associated protein 6 533 666 - -
Glsi08g0136 749 Coils Coil 462 482 - -
Glsi08g0136 749 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 175 736 IPR007145 GO:0000226|GO:0008017
Glsi08g0136 749 MobiDBLite consensus disorder prediction 692 708 - -
Glsi08g0136 749 Pfam Microtubule associated protein (MAP65/ASE1 family) 180 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0136 Glsi-ChrGlsi08 1242281 1247517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0136 175 684 EF-hand Containing Proteins AT5G62250 42.308 1.33e-116 360
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0136 08 1242281 1247517 Glsi08g0136 08 1242281 1247517 ECH