Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0072 ATGGGTCAGATCGTGAGGAGGAAGAAGAAAGGACGCCCTTCCAAGGCTTATCTGGCTCACCGCTCCGGCGACTCTCCGGCCGCCGCCCAGCCCGACCTTCGACGCAGCCTCCGCCGCCGGAATGTGAGGTACAACATAGAGTTCGACGACTACTTGGATGAGGACGATGAGGACGAGGAGGAGGACGAGAGGAGAAGGGAGAAGAAGCTGAAGCTAGTGGTGAAGCTGAATCAGGATAGGGATAGGGACGAAGATGAGTCGGCGCCCAGCCGCACGCGCTCCGGGGCGCGTGGCGAGCACTCGCGGGATTCTTCGGAGGATGAAAGCGAGAAAAAGCCCCTGAAGAAGAGGAGGATCGGCGGCGGGAGGCGTGACAATGAAGATGGCGAAGAGGAAGAGGAAGAAGGAGGGGATGATAATGAGGAAGAAAACGAAAACGAAAACGAAGAAGAAGATGAGAATCTACATGACAATAATGACGATGATGATGGTGAGGTAAAAGGCAGAAAAGTGGATTCGAAAGGGCTCCACCCTATTCCAGGAACTCCGAGAAAATCTCCATCTGGGATTCCATTGCCTGATAAGAGGACTCTTGAATTGATCCTCGACAAGCTTCAGAAGAAGGACACATATGGTGTGTATGCAGAGCCTGTTGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCAATGGACTTTGCCACAGTGAGGAAGAAGTTAGCAAATGGATCATATCATACCTTGGAACTATTTGAGAGTGATGTATTTTTAATTTGCTCAAATGCAATGCAATACAATTCACCAGAAACTATATACCACAAACAGGCTCGATCAATACAAGAATTAGCACGGAAGAAGTTTGAGAAGTTAAGGATTGACTTTGAAACCTCTCAAAGCGAGCTGAAGTCAGAACAAAAAACAAGATTAAATTCCTTGGTCAGAAAGCAAGCGAAGAAGCCACTCCTTCGTGCATCACAGGAACCTGTTGGTTCTGATTTCTCTGCAGGTGCAACTCTTGCTAATATTGGAGATGTACAGCCAACTTCCCACCCTGTCTTAGGTGGAAGCTGTGAGAGGCCTTGCAACAATGATGGTCTTGCAGAGGGTAATGCTTTCTTGATTGATGCAAATCAAGAGAAAACAGAAGATTTTTTATCAGGGAAGAGCTTGCTCTCTAAGTTGGGAAGAAAGCCATTTGGTCTTGATGAGAATCGTCGTGCAACTTATAGTGTTTCTATGCAACCAATTTCCAAATCAGACTCAATATTTATGACCTTTGAGAGTGAAATTAAGCAGCTGGTTACTGTTGGGCTTCATGCTGAATGTTCCTATGCCAGGAGTTTAGCACGTTTTGCTGCAACTCTAGGGCCTGTTGCTTGGAAAATTGCTTCCCAGAGGATTCAGCAGGCACTGCCAGCTGGCTGTAAATTTGGTCGAGGTTGGGTTGGAGAGTACGAACCTCTTCCGACCCCAGTATTAATGCTTGATAACCGTATCCAAAAAGAACCTGGTTTTGTTTCGAAGTTTCAGTCTGCTACTGACTTAATAAAGGATGGCAAAAATGGTAAGATTCCAGAACCCTCCATGGAACATCATGTTCATGGACTGATGTTAGAGGGAAAACAGCCTTCCAGTGATCCTGCTAGTGGACTTACATCAGAAGGAAAACCATCTTTGTTTGGTTTTTCTGGAATAAGACCCAGTGCTCCTGTCAATGTCATTTATCAGCAGCAAAATGTCCCATCCAGGAGCTCTGGCAAGCCTGAGAATAAGGGTTTGAAACAAGTGGAGTTGAACTCTTTGCCCTCAAGTAATCATAATAATGCCAGTCTTAGTGCAAAGTTTTCAAGTGATGCTTCTCCAGGAGTGTCTAAGCCTAGAGAGATGGTACCTAGAAACATGAATACTTTGGCATCTATACCTTTCAAAGAGCCGGATACTAATGGAGTTGTTGGTGGAGACTTACCTAATGGGAAAGTCATAAACTCTAGTTTGAATAGACGGGTGACTGTTCCACCATCTGAAAGTACTTCAAATCAAACAGGTAGAGCTGCTCCTTTTGTTCCCCATGGCCAAGGGCTGGATCTTAGTGACCCAGGGCTGATGAGGATGTTGGCCTTAAAGGCTCAGGCTCAGAAGCAACAAACTTCTTCCAATCATTCTCCAGTTGATACTCCGGTGACTGGTCCACCATCTGAAAGTACTTCAAGTCAAACGGGTAGAGCTACTCCTTTTGTTCCCCATGGGAAAGGGCTGGATCTTAGTGACCCAGTGCTGATGAAGATGTTGGCCTTAAAGGCTCAGGCTCAGAGGAAACAAACTTCTTCCAATCATTCTCCAGTTGATACTCCAGTGACTGGTCCACCATCTGAAAGTACTTCAAGTCAAACGGGAAGAGCTTCTCCTTTTGTTCCCCATGGGCAAGGAGTGGATCTTAGTGACCCAGTGCTGAAGAAGATGTTGGCCTTAAAGGCTCAGGCTCAGGCTCAGAAGCAACAAACTTCTTCCAATCATTCTCCAGTTGATACTCCAGTGACTGGTCCACCATCTGAAAGTACTTCAAATCAAACAGGTAGAGCTGCTCCTTTTGTTCCCCCTGGGCAAGGGGTGGATCTTAGTGACCCAGTGCTGATGAAGATGTTGGCCTTAAAGGCTCAGGCTCAGACTCAGAAGCAACAAACTTCTTCCAATCATTCTCCGGTCGATACTCCACCTGCGACATCATCAGTTCCATCAGGACGGAGAGATGACTTGAGCAATGCTGCAGCAGCAGCAGCCCGTGCATGGATGTCTGTAGGGGCAGGAGGTTTTAGACAAGGACCTGATAATTCTAGTTCCCCCAAAAATCAAATTTCTGCAGATTCATTGTATAACCCATCGCGAGATTTTCATCAGCATATTCCACGAATCAGGGGGGAGTTTCCTTCTGGTGGAATACCTTTCCAGTCTGAGAAGAGCAATTTTCCATTTCAGGCGCTAGCACCTCAACCTATTCACACAGGCGGAGTTTCACAATTTCCAAATCGACCAATGGTTTTCCCTCAATTAGCAGCTGCTGACCTATCTAGGTTTCAAATGCAGTCCCCTTGGCGAGGTCTCAGTCCGCATGACCAACCAAGGCAAAAACAGGAAACACTTCCTCCTGACTTGAATATTGGTTTTCAATCTCCAGGGTCACCTGCAAAACAATCTTCTGGTGTGATGGTTGACTCACAGCAACCAGACCTGGCTTTGCAACTATGA 3252 0.4646 MGQIVRRKKKGRPSKAYLAHRSGDSPAAAQPDLRRSLRRRNVRYNIEFDDYLDEDDEDEEEDERRREKKLKLVVKLNQDRDRDEDESAPSRTRSGARGEHSRDSSEDESEKKPLKKRRIGGGRRDNEDGEEEEEEGGDDNEEENENENEEEDENLHDNNDDDDGEVKGRKVDSKGLHPIPGTPRKSPSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYHTLELFESDVFLICSNAMQYNSPETIYHKQARSIQELARKKFEKLRIDFETSQSELKSEQKTRLNSLVRKQAKKPLLRASQEPVGSDFSAGATLANIGDVQPTSHPVLGGSCERPCNNDGLAEGNAFLIDANQEKTEDFLSGKSLLSKLGRKPFGLDENRRATYSVSMQPISKSDSIFMTFESEIKQLVTVGLHAECSYARSLARFAATLGPVAWKIASQRIQQALPAGCKFGRGWVGEYEPLPTPVLMLDNRIQKEPGFVSKFQSATDLIKDGKNGKIPEPSMEHHVHGLMLEGKQPSSDPASGLTSEGKPSLFGFSGIRPSAPVNVIYQQQNVPSRSSGKPENKGLKQVELNSLPSSNHNNASLSAKFSSDASPGVSKPREMVPRNMNTLASIPFKEPDTNGVVGGDLPNGKVINSSLNRRVTVPPSESTSNQTGRAAPFVPHGQGLDLSDPGLMRMLALKAQAQKQQTSSNHSPVDTPVTGPPSESTSSQTGRATPFVPHGKGLDLSDPVLMKMLALKAQAQRKQTSSNHSPVDTPVTGPPSESTSSQTGRASPFVPHGQGVDLSDPVLKKMLALKAQAQAQKQQTSSNHSPVDTPVTGPPSESTSNQTGRAAPFVPPGQGVDLSDPVLMKMLALKAQAQTQKQQTSSNHSPVDTPPATSSVPSGRRDDLSNAAAAAARAWMSVGAGGFRQGPDNSSSPKNQISADSLYNPSRDFHQHIPRIRGEFPSGGIPFQSEKSNFPFQALAPQPIHTGGVSQFPNRPMVFPQLAAADLSRFQMQSPWRGLSPHDQPRQKQETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 602 632 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 769 815 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 602 622 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 888 925 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 1032 1083 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 127 159 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 160 174 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 671 694 - -
Glsi08g0072 1083 Gene3D - 193 314 IPR036427 GO:0005515
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 888 918 - -
Glsi08g0072 1083 PRINTS Bromodomain signature 223 239 IPR001487 GO:0005515
Glsi08g0072 1083 PRINTS Bromodomain signature 257 276 IPR001487 GO:0005515
Glsi08g0072 1083 PRINTS Bromodomain signature 239 257 IPR001487 GO:0005515
Glsi08g0072 1083 ProSitePatterns Bromodomain signature. 212 268 IPR018359 -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 771 805 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 671 688 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 941 962 - -
Glsi08g0072 1083 SMART bromo_6 187 295 IPR001487 GO:0005515
Glsi08g0072 1083 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 841 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 33 48 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 827 875 - -
Glsi08g0072 1083 SUPERFAMILY Bromodomain 178 293 IPR036427 GO:0005515
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 937 964 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 542 563 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 1 193 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 829 864 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 1 16 - -
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 712 746 - -
Glsi08g0072 1083 ProSiteProfiles Bromodomain profile. 206 276 IPR001487 GO:0005515
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 62 126 - -
Glsi08g0072 1083 Pfam Bromodomain 200 280 IPR001487 GO:0005515
Glsi08g0072 1083 MobiDBLite consensus disorder prediction 711 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0072 Glsi-ChrGlsi08 642141 648429 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0072 08 642141 648429 Glsi08g0072 08 642141 648429 ECH