Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0046 ATGATTCGGTACCAGAAGTGCTTGTTTTCTTCTTCTTTGGGAATTGCCGACGAGATAGTTCAAAACAGAAGGTGGAAAGATAGCGTGATTCTGCTGAACATTATGCAGAGCTCATTTGGGTTAGCAAAAGACTTGATCTGGCTAGTCAATGGGTCAAACCCGAAGGAACCCCCCGAGACTTTGCAATGGAGCTCCGTGAAAAGTAAAGCGGAGAAGACTACAAAGTTGCCTTGCCGTGCTGTTCCGGCGTCTTCCGGACGACTCAGAGGGAGCGAGGGCGTAGAAATGGTACTCCAATTCATTCTAACCGTCGTCTTCGTTGTTTCTTCAACTGTCACCGCCGATTACGTTCGCCCTTTGCCTCGCAAGACCCTTCACTTCCCATGGGATTCAAAGCCCTCCTCCTACCCCCAGCAGGTGCACATTTCCTTGGCAGGAGACAAGCATATTAGAGTTACCTGGACAACTGATGATGATTCATCACCTTCAATTGTAGAATATGGATTGTTACCTGGGAGATATGACACTGTAGCCGAAGGAGAGAGCACCTCTTATAGATATCTGTTCTACAGCTCTGGAAAGATACACCACACTGTAATCGGGCCCTTGAAGGATAGTATTGTGTATTTTTATCGGTGTGGTGGACAAGGTCCTGAGTTCCAGTTTAAAACTCCTCCAGCTCAATTACCAATTACTTTTGCTGTGGCTGGGGATCTGGGTCAAACTGGTTGGACTAAATCAACATTAGATCACATTGGTCGATGCAATTATGATGTCCATCTGCTTCCAGGAGACCTTGCATATGCTGATTATATCCAACGTCGATGGGACACATTTGGTAAGCTAGTGCAGCCACTTGCTAGTACAAGGCCATGGATGGTAACACAAGGGAACCATGAAAAGGAAAGCATACTGATGCTGAAGGATGGGTTTGAATCATATAATGCCAGATGGAAGATGCCATTTGAGGAAAGTGGGTCAAGTTCAAATCTCTATTATTCATTTGAAGTTGCAGGTGCTCATATTATCATGCTTGGCTCCTATACAGACTATGATGAGTACTCAGAACAATTTAGATGGCTGAAGACAGATCTGTCAAAGGTGAACAGGCAAAGGACACCTTGGCTGATTGTGTTATTTCATGTGCCATGGTATAATAGTAACAAAGCTCATCGGGGTGAAGGCAATGATATGATGGCAGCTATGGAGCCATTGCTTTATGCTGCTAGTGTTGATTTAGTTCTTGCTGGTCATGTGCATGCTTATGAACGTTCAAAACGTGTGAATAATGGAAGAATAGATCCTTGTGGTGCTCTCCATATAACTATTGGTGATGGAGGAAACAGAGAAGGCTTAGCTTATAAGTATATAAACCCACAACCGGCGTGGTCAGAATTCCGTGAAGCCAGTTTCGGTCATGGTGAGCTCAAGATAGTAAATTCTTCTCATGCTTTCTGGAGTTGGCACAGGAACGACGACGATGAGCCAGTAAAATCTGATGATATCTGGATAACCTCTTTGGTTAGCTCAGGATGTGTTGATCAGAAGAGGCATGAACTTAGGAATATGCTTTTGACACCTTAA 1584 0.4432 MIRYQKCLFSSSLGIADEIVQNRRWKDSVILLNIMQSSFGLAKDLIWLVNGSNPKEPPETLQWSSVKSKAEKTTKLPCRAVPASSGRLRGSEGVEMVLQFILTVVFVVSSTVTADYVRPLPRKTLHFPWDSKPSSYPQQVHISLAGDKHIRVTWTTDDDSSPSIVEYGLLPGRYDTVAEGESTSYRYLFYSSGKIHHTVIGPLKDSIVYFYRCGGQGPEFQFKTPPAQLPITFAVAGDLGQTGWTKSTLDHIGRCNYDVHLLPGDLAYADYIQRRWDTFGKLVQPLASTRPWMVTQGNHEKESILMLKDGFESYNARWKMPFEESGSSSNLYYSFEVAGAHIIMLGSYTDYDEYSEQFRWLKTDLSKVNRQRTPWLIVLFHVPWYNSNKAHRGEGNDMMAAMEPLLYAASVDLVLAGHVHAYERSKRVNNGRIDPCGALHITIGDGGNREGLAYKYINPQPAWSEFREASFGHGELKIVNSSHAFWSWHRNDDDEPVKSDDIWITSLVSSGCVDQKRHELRNMLLTP 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0046 527 Pfam Iron/zinc purple acid phosphatase-like protein C 439 494 IPR025733 -
Glsi08g0046 527 Pfam Purple acid Phosphatase, N-terminal domain 137 224 IPR015914 GO:0003993|GO:0046872
Glsi08g0046 527 Gene3D - 228 514 IPR029052 -
Glsi08g0046 527 SUPERFAMILY Metallo-dependent phosphatases 230 497 IPR029052 -
Glsi08g0046 527 CDD MPP_PAPs 230 506 IPR041792 -
Glsi08g0046 527 Pfam Calcineurin-like phosphoesterase 232 422 IPR004843 GO:0016787
Glsi08g0046 527 PANTHER ACID PHOSPHATASE RELATED 103 505 IPR039331 GO:0003993
Glsi08g0046 527 SUPERFAMILY Purple acid phosphatase, N-terminal domain 127 226 IPR008963 GO:0003993|GO:0046872
Glsi08g0046 527 Gene3D - 136 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0046 Glsi-ChrGlsi08 459835 469511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0046 137 517 Miscellaneous Gene Families AT2G03450 26.856 2.78e-30 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0046 08 459835 469511 Glsi08g0046 08 459835 469511 ECH