Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1646 ATGGGCTGTTTGGATGAGGGACATTTCAATGTTGAGCTTGAAAGAGGAGTGAGTATTGCCTGTGCTGAATTGGATTTCGAGCAAGAAGAGAATAAAGCAGCCATTGAGGATGCTGTGAAAGTTCTGTTGCTGGGTCTGGGAGAAGATATAAACAGGGAAGGTCTAAAAAAGACACCACTTCGTGTCGCCAAGGCTCTCCATGAAGGAACCAGAGGTTACCGACAAAAGGTGAAGGACATTGTGCAAGGTGCTTTATTCCCTGAAGCTGGTCTGGATACTAGAATCGGTCATGCAGGGGGAGCAGGTGGACTTGTGATTGTTCGAGATCTTGACCTTTTCTCATATTGTGAGTCGTGCTTGCTTCCATTCCAGGTCAAATGTCATGTTGGTTATGTCCCTTCTGGCCAAAGAGTAGTGGGTTTAAGCAAGCTCTCTCGTGTGGCAGATGTGTTTGCAAAACAACTCCAAGAGCCTCAGCGTTTGGCAGATGAGGTCTGTACAGCTTTGCATCAGGGAATAAAGCCAGCAGGTGTTGCTATCATACTTCAGTGTACACATATCCACTTTCCAGATATAGAATCAGTCTTTCTTGACCCAAATCACCAAGGATGGGTTAAGATACTTGTATTTTCAGGTTCTGGGGTTTTTGAAAACAAAAATGCCGATGTTTGGGCTGATTTCTTTAGTCTTCTCAAATTTAAAGGTATTGATATGGAAAAAATTCATTTAAAAGGCTCAGCTGAACAATGCTGGTGTCCTTCTCAGTCTTCTCTTTCTTCTAAACCTTCCTCCAAAATTGGACCAGTCAATCCAGTAATGGTCACTGCAGTAGCTTCAATTCTCAAATCTTTGGGAGAAGATCCATTAAGGAAGGAGCTTGCAGGGACTCCTGGCCGATTTGTGAAATGGCTGATGAACTTCCAAAACAATAACATGGAGATGAAGCTGAGTGGTTTCCTTTGTGGTGGGATAGATTCTCTCAACACAAATGGGGAAGTTAACTTCAATGAAAAGCAAATATGCTCTGAGCTGAACTTACCATTTTGGTCTCAATGTGAACATCACTTACTTCCATTTCAAGGTGTTGTTCACATAGGATACCTTGTCTCCGAAATATTTAATCCCATTGGAAAATCCCTTTTACAGTCAATAGTACATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGACTTACTAGGCAGATAGCAGAAACCATTTCACCACTGTTAGGTGGAGATGTGATAGTAGTTGTAGAGGCAAGCCACACATGTATGATTTCTAGGGGAATTGAGAAGTTTGGAAGTAGTACAGCTACCATTGCTGTATTAGGACGCTTTTCAACTGACCCTGCCGCAAGGGCTATGTTCTTGCAGAGTATTCCGAGTGCTACATCTTCTGGAGGGCAATGA 1410 0.4262 MGCLDEGHFNVELERGVSIACAELDFEQEENKAAIEDAVKVLLLGLGEDINREGLKKTPLRVAKALHEGTRGYRQKVKDIVQGALFPEAGLDTRIGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGQRVVGLSKLSRVADVFAKQLQEPQRLADEVCTALHQGIKPAGVAIILQCTHIHFPDIESVFLDPNHQGWVKILVFSGSGVFENKNADVWADFFSLLKFKGIDMEKIHLKGSAEQCWCPSQSSLSSKPSSKIGPVNPVMVTAVASILKSLGEDPLRKELAGTPGRFVKWLMNFQNNNMEMKLSGFLCGGIDSLNTNGEVNFNEKQICSELNLPFWSQCEHHLLPFQGVVHIGYLVSEIFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDPAARAMFLQSIPSATSSGGQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1646 469 FunFam GTP cyclohydrolase 1 331 462 - -
Glsi07g1646 469 Pfam GTP cyclohydrolase I 275 460 IPR020602 -
Glsi07g1646 469 Pfam GTP cyclohydrolase I 35 187 IPR020602 -
Glsi07g1646 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 18 232 - -
Glsi07g1646 469 Gene3D - 98 234 IPR043133 -
Glsi07g1646 469 Gene3D - 24 80 IPR043134 -
Glsi07g1646 469 Gene3D - 269 313 IPR043134 -
Glsi07g1646 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 272 461 - -
Glsi07g1646 469 FunFam GTP cyclohydrolase 1 99 234 - -
Glsi07g1646 469 Gene3D - 330 462 IPR043133 -
Glsi07g1646 469 PANTHER GTP CYCLOHYDROLASE I 25 187 IPR001474 GO:0003934|GO:0046654
Glsi07g1646 469 FunFam GTP cyclohydrolase I 1 267 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1646 Glsi-ChrGlsi07 54043129 54047174 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1567 06 60750539 60755019 Glsi07g1646 07 54043129 54047174 CCT