Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1225 ATGTTGAGAAGTCTTCAATTAGACTTCACTGACAAAACCATCATCTTAGCTTTGAGATTCTCTTCTCTGCTATTTTCCTTTTCTTCAATACTTAGTACCCATGGCCATGGCTTCCCAATCAAAGCTGACATCTTCATCTATGCAGGCTGCTCCCAAGAAAAATACCAACCCAACTCACCATTTGAAGGCAATCTAAATTCTTTTTTGGCTGCATCTCTCAGCTCATCCTCCCAAGTTTCTTACAATAGCTTTGCTATTGGAAATGAAAGCTCAACCCCACCAGAAGGGACCATATATGGCTTATATCAGTGTAGGGGTGATTTGCAGCCACTAGACTGCAAAAAATGTGTTGAAAATTCTGTTCGTCAAATAGGGTTGGTCTGTCCCTATGCCTTAGGGGCTTCCCTGCAGCTAGAAGGCTGCTATCTCAGATATGAACATGTTGATTTCCTAGGCAAGGCTGACACAAGCCTTAGGTACAAGAAGTGTCGGAAAGCCGTGACTGGCGATGCTGAGTTCTTCAGGAGAAGAGATGATGTTCTTGCTGATTTGCTAGGAGCTAATGGGTTTAGAGTCAGTAGTTCTGGTTTTGTTGAAGGGTTTGTTCAGTGTTTGGGGGATTTGACTGCAGCAGATTGCTCCTCCTGCCTTGTAGAAGCAGTGGGAAAGCTTAAGAGCTTGTGCGGATCAGCAGCAGCAGCTGATGTGTTCTTGGCACAGTGTTATGCTCGATACTGGGCATCTGGCTACTATGAGGATGCTGCAGATTCCTACAACGGGGACCAAGTGGAAAAAGCAATATTCATTATTGTGGGATTACTGGTAGGTCTAGCCATTCTCGTTGTCATTCTCTCAATTTGCCAAAAAGCAATGGGTAAATAG 882 0.441 MLRSLQLDFTDKTIILALRFSSLLFSFSSILSTHGHGFPIKADIFIYAGCSQEKYQPNSPFEGNLNSFLAASLSSSSQVSYNSFAIGNESSTPPEGTIYGLYQCRGDLQPLDCKKCVENSVRQIGLVCPYALGASLQLEGCYLRYEHVDFLGKADTSLRYKKCRKAVTGDAEFFRRRDDVLADLLGANGFRVSSSGFVEGFVQCLGDLTAADCSSCLVEAVGKLKSLCGSAAAADVFLAQCYARYWASGYYEDAADSYNGDQVEKAIFIIVGLLVGLAILVVILSICQKAMGK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1225 293 ProSiteProfiles Gnk2-homologous domain profile. 151 250 IPR002902 -
Glsi07g1225 293 Pfam Salt stress response/antifungal 168 245 IPR002902 -
Glsi07g1225 293 Pfam Salt stress response/antifungal 50 147 IPR002902 -
Glsi07g1225 293 ProSiteProfiles Gnk2-homologous domain profile. 43 150 IPR002902 -
Glsi07g1225 293 FunFam cysteine-rich repeat secretory protein 3 42 150 - -
Glsi07g1225 293 FunFam Cysteine-rich repeat secretory protein 15 155 248 - -
Glsi07g1225 293 Gene3D - 42 150 IPR038408 -
Glsi07g1225 293 Gene3D - 162 248 IPR038408 -
Glsi07g1225 293 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 18 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1225 Glsi-ChrGlsi07 18744244 18746374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1225 51 255 Receptor kinase-like Gene Family AT4G23160 28.936 4.20e-15 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g1225 07 18744244 18746374 Glsi07g1225 07 18744244 18746374 ECH