Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1101 ATGTCGTTGTCGGATTCCGAGACCTCCCAGAGCGGAGCATCAGAGTACAAACCCTTCCGCCAGATTAGCCGTGATCGGTTATTGTATGAAATGCTTGGATCGGCAAAGTCAGGGGATTCTAAAGCATGGAAGGTGCTCATAATGGATAAAGTCACTGTGAAAGTTATGTCACAATCATGTAAAATGGCAGATATCACAGACCAAGGAGTTTCCTTGGTGGAAGACATTTTCAGGAGAAGGGAACCATTACCATCAATGGATGCTGTTTATTTCATGCAACCAATAAAAGAGAATGTTATCATGTTTTTGTCTGACATGTCTGGAAGGGAGCCCTTATACAAGAAAGCATTTATATTTTTTAGCTCACCAGTCCCAAGGGAATTTATAAATCACATTAAGTGTGATACAAGTGTCTTACCCCGCATAGGTGCATTGAGAGAGATGAATTTGGAATATTTTCCAGTAGATAGCCAGGCATTTGTCACTGATCAAGAAATAGCAATGGAGGAACTTTATGGCAACATTGAGAATACTAGAAGATTTAATTCCTGCTTGACCAATATGGCAACTCGAATAGCTACAGTTTTTGCTTCCCTAAATGAGTTACCATGTGTACGGTATCATGCTGCCAAGGAAAGTGATGAATCTACACTAGCAGTAACTCGTGATTTAGTTCCTACCAAGCTTGCTAATGCTGTTTGGGACATAGTTTCTAAATATAAATCTACCATTATGAACTTTCCACAGAGTGAAACATGCGATCTACTTATTGTGGATAGATCTGTCGATCAGATTGCTCCTATTATTCATGAATGGACCTACGATGCTATGTGCCACGATTTGTTGGATATGGAGGGAAATAAATACATGCATGAGGTTCCCAACAAAACAGGGGGTGAGCCTGAGAAGAAGGAGGTCCTTCTAGAAGACCATGATTCAGTTTGGCTTGAGCTTCGCCATACACATATAGCAGATGCTAGTGAAAGGCTGCATGACAAGATGACCAACTTTGTATCAAAGAACAAAGCTGCACAAATCCAACAAAGTGGAAGAGATGGTAGTGAAATATCCACACGAGATTTGCAGAAAATGGTTCAAGCTTTGCCCCAATACACTGAGCAAATGGAAAAGATTTCACTTCATGTAGAGCTAGCTGGAAAGATCAACAAAATTATCAGAGAAACAGGACTTCGAGAGCTTGGACAATTGGAGCAGGATCTTGTTTTTGGTGATGCAGGGGCCAAGGATGTTATTAACTTTCTAAGAACAAAGCAGGATACAACACCTGAGTATAAGTTGCGTTTATTAATGATTTATGCATCTGTATATCCTGAAAAGTTTGAGGGAGATAAAGCTACAAAGCTAATGCAGTTGGCAAGACTATCACCAGATGACATGAAAGTCATCAGTAATATGCAAATGCTGGCAGGATCATCAGGAAGGAAGTCATCCACCGGAAGTTTCTCACTAAAGTTCAATGCCCAGAAGACAAAGCAAGCAGCACGTAAAGATCGTACCGACGAGGAGGAAACTTGGCAACTATTTCGATTTTACCCCATGTTAGAGGAGCTCATTGAAAATCTCAACAAGGGTGCATTACCAAAGAATGACTATTCATGTAAAAATGAACCAAGTGCTCCTGTCCAAGGGGGCTCTGTTAGAGGCGGCCAACGCACACAGTCAACTCCATCTACTGCTCCGCATTCAATGAGATCAAGACGGACAGCAAACTGGGGACGGCCTCGTCATTCAGACGATGGATACTCAAGTGACTCCACGTTGAAGAATGTGTGTAATGATTTCAAGAAGATGGGGAAGCGCATCTTTGTGTTTATTATTGGCGGGGCTACTCGATCTGAGCTACGAGTTTGCCACAAAATGACAGCAAAACTGAGGAGGGAGGTCATCCTAGGTTCTTCTTCCATCGATGATCCTCCCCAATATATCACGCTTCCCGAGCATGTAGAATTTGAGTTCATACATAGAAATGTCATTGACAACTTCAGCATCTTTAGGCATGATGTTGGATAG 2031 0.4175 MSLSDSETSQSGASEYKPFRQISRDRLLYEMLGSAKSGDSKAWKVLIMDKVTVKVMSQSCKMADITDQGVSLVEDIFRRREPLPSMDAVYFMQPIKENVIMFLSDMSGREPLYKKAFIFFSSPVPREFINHIKCDTSVLPRIGALREMNLEYFPVDSQAFVTDQEIAMEELYGNIENTRRFNSCLTNMATRIATVFASLNELPCVRYHAAKESDESTLAVTRDLVPTKLANAVWDIVSKYKSTIMNFPQSETCDLLIVDRSVDQIAPIIHEWTYDAMCHDLLDMEGNKYMHEVPNKTGGEPEKKEVLLEDHDSVWLELRHTHIADASERLHDKMTNFVSKNKAAQIQQSGRDGSEISTRDLQKMVQALPQYTEQMEKISLHVELAGKINKIIRETGLRELGQLEQDLVFGDAGAKDVINFLRTKQDTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLARLSPDDMKVISNMQMLAGSSGRKSSTGSFSLKFNAQKTKQAARKDRTDEEETWQLFRFYPMLEELIENLNKGALPKNDYSCKNEPSAPVQGGSVRGGQRTQSTPSTAPHSMRSRRTANWGRPRHSDDGYSSDSTLKNVCNDFKKMGKRIFVFIIGGATRSELRVCHKMTAKLRREVILGSSSIDDPPQYITLPEHVEFEFIHRNVIDNFSIFRHDVG 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1101 676 Gene3D - 153 649 IPR027482 -
Glsi07g1101 676 Gene3D - 394 518 - -
Glsi07g1101 676 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 31 650 IPR001619 GO:0016192
Glsi07g1101 676 MobiDBLite consensus disorder prediction 542 572 - -
Glsi07g1101 676 Gene3D - 12 147 IPR043154 -
Glsi07g1101 676 SUPERFAMILY Sec1/munc18-like (SM) proteins 19 649 IPR036045 -
Glsi07g1101 676 Pfam Sec1 family 44 649 IPR001619 GO:0016192
Glsi07g1101 676 MobiDBLite consensus disorder prediction 536 590 - -
Glsi07g1101 676 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 271 393 IPR043127 -
Glsi07g1101 676 PIRSF VPS45_Sec1 14 663 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1101 Glsi-ChrGlsi07 15050073 15075938 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g1101 07 15050073 15075938 Glsi07g1101 07 15050073 15075938 ECH