Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1018 ATGGCTGATGGATCAGTGAGTCTCCACAAGGCTTTAATGTTTTGTTTCCAATCTTGTGGAGGAGGAGGCAAAGAACCCATTAGTCTGAAAGGGACGTTACGAACGAGAAAGAGAGTCCCCGACACAACTTTCAGAGTTTTAGAGTTGGATTTTCTTTTAGTTCCACTTGTTGGTCTCTGCAGAGTCTCGTCTCAATCGACTTCCCAAGATCCTTCGCGATATTATTATCAATTTCGCTGGAAGCGGTTCTTGAAATCTGGGAAAATGGGTTTGTTTTCTGGGCTCTTTCTGGGAATAGCATTGGGCATCGCTTTGATGGCTGGATGGCAGCACATGATGAGGTACCGAAGCGCCAAGCGAATTGCAAAGGCAGCTGATATAAAACTCCTTGGATCCCTTAACAGAGATGATTTAAAGAAAATTTGTGGTGATAATGTTCCTGAATGGATATCTTTTCCTGTATTTGAACAGGTTAAATGGCTGAACAAGCAGCTGTCCAAACTGTGGCCATTTGTGGCAGAAGCAGCATCAATGGTGATCAGAGAATCTGTTGAACCGCTACTCGAAGAGTACAGACCTCCAGGAATTACTTCATTGAAGTTTGGCAAGCTGTCGCTTGGAACTGTTGCACCAAAGATTGAAGGTATCCGCATTCAGAGTATTAACAAAGGTCAAATCATAATGGACATTGATTTTCGTTGGGGAGGTGATCCCAGCATTATTTTGGCTGTTGAAGCTGCACTTGTTGCATCGATCCCTATTCAGTTGAAGGATCTCCAAGTTTTCACCGTTGTCCGTGTTATCTTTCAACTTGCTGAAGAGATACCCTGCATTTCTGCTGTCGTTGTTGCCCTACTTGCTGAGCCAAAGCCTAGAATTGATTACACTCTGAAGGCTGTTGGTGGAAGTTTGACAGCAATTCCTGGACTTTCAGATATGATTGATGATACTGTGGACTCAATTGTTACTGATATGCTCCAATGGCCTCATAGGATTGTTGTTCCTATTGGCGGTATACCTGTTGATACTAGGGAACTGGAGCTTAAACCACAGGGCAAGCTTACAGTGACAGTAGTGAAAGCCAATGATTTGAAGAATAAGGAAATGATTGGGAAGTCTGATCCTTATGTAGTTGTTTATATTCGACCCTTATTTAAGGTCAAAACCAAGGTTATTGATAACAACCTGAATCCTGTTTGGGATCAGACATTTGAATTGATTGCAGAAGACAAGGAGACCCAGTCGCTCATTCTACAGGTTAATGATAAAGATATTGGGCAAGATAAGCTATTGGGAATAGCAAAATTACCCCTTATCAATCTGGAAGCAGAAACTGAAAAGCAATTTGAATTGAGGCTCCTGTCATCACTTGACACACTGAAGGTAAAAGATAAGAGGGACCGAGGATTTTTGACAATTAAGGTGTTGTACCATCAATTCAGCAAGGAAGAGCAGTTGGATGCTCTAGAAGCAGAGAAGAAGATACTAGAAGAAAGGAAGAAACTAAAAGAGGCAGGAGTGATAGGAAGCACTGTGGATGCAGTGGAAGGAGTGGGATCACTTGTTGGGTCTGGTGTTGGATTGGTTGGTACGGGTGTTGGTGCTGGTGTTGGATTTGTTGGGAGTGGTCTTGGAGCTGTTGGTAGCGGACTGAGCAAGGCTGGAAAGTTCATGGGCAGGACTATCACTGGACATAGTGGCAATGCCAGAAGAAGTGGTTCATCCACTCCAGTCAACAATGTTCAGGAAAATGGCGGCGGTGCGAAGCCTCTGTGA 1776 0.4352 MADGSVSLHKALMFCFQSCGGGGKEPISLKGTLRTRKRVPDTTFRVLELDFLLVPLVGLCRVSSQSTSQDPSRYYYQFRWKRFLKSGKMGLFSGLFLGIALGIALMAGWQHMMRYRSAKRIAKAADIKLLGSLNRDDLKKICGDNVPEWISFPVFEQVKWLNKQLSKLWPFVAEAASMVIRESVEPLLEEYRPPGITSLKFGKLSLGTVAPKIEGIRIQSINKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTVVRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTAIPGLSDMIDDTVDSIVTDMLQWPHRIVVPIGGIPVDTRELELKPQGKLTVTVVKANDLKNKEMIGKSDPYVVVYIRPLFKVKTKVIDNNLNPVWDQTFELIAEDKETQSLILQVNDKDIGQDKLLGIAKLPLINLEAETEKQFELRLLSSLDTLKVKDKRDRGFLTIKVLYHQFSKEEQLDALEAEKKILEERKKLKEAGVIGSTVDAVEGVGSLVGSGVGLVGTGVGAGVGFVGSGLGAVGSGLSKAGKFMGRTITGHSGNARRSGSSTPVNNVQENGGGAKPL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1018 591 CDD C2 354 448 - -
Glsi07g1018 591 CDD SMP_SYT 147 336 - -
Glsi07g1018 591 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 89 512 IPR045050 GO:0008289
Glsi07g1018 591 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 156 336 IPR039010 -
Glsi07g1018 591 Gene3D C2 domain 347 505 IPR035892 -
Glsi07g1018 591 FunFam synaptotagmin-4 isoform X1 347 505 - -
Glsi07g1018 591 ProSiteProfiles C2 domain profile. 335 451 IPR000008 -
Glsi07g1018 591 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 350 479 IPR035892 -
Glsi07g1018 591 MobiDBLite consensus disorder prediction 565 583 - -
Glsi07g1018 591 SMART C2_3c 353 450 IPR000008 -
Glsi07g1018 591 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 154 337 IPR031468 GO:0008289
Glsi07g1018 591 MobiDBLite consensus disorder prediction 562 591 - -
Glsi07g1018 591 Pfam C2 domain 352 447 IPR000008 -
Glsi07g1018 591 Coils Coil 479 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1018 Glsi-ChrGlsi07 12131843 12151331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1018 354 443 Lipid Metabolism Gene Families AT4G00700 41.111 1.15e-10 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g1018 07 12131843 12151331 Glsi07g1018 07 12131843 12151331 ECH