Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0710 ATGCCGGGTCTAGTTGCCGTGAAAACCTCACCTCATACGCCGCCGGTTACTGTAGGCGTTTTCGGCACCCAAGGCCATGACCCGACGAAGAACGAGTACTCCAATGGCGGCCAACGGAGAACCCCATCGCCGCTCTTGAATCGAACCCCGTCACGAATCTCCAAGAAGGCACCGGAAAAGCTGATCATGGACGAGTCCTCCCTCGACAACCCGGATCTGGGTCCGTTTCTTTTGAAGCTTGCCCGAGACACAATAGCTTCGGGCGAGAACCCGAATAAAGCATTGGACTACGCGATTCGGGCGTCAAAATCGTTCGAGCGGTTATCGGGTTCGAGTCTGGATCTTGCAATGTGTTTGCACGTTGTTGCGGCGATCTATAGCAGTTTGGGGCGGTTCGGCGAGGCAATTCACGCATTGGAGCGTTCCATTGAGTTCCCGGATATTGGGAAAGGGTCGGATCACGCCATGGCGAAGTTTTCCGGGTACATGCAGTTAGGGGATACGTATTCGATGATCGGGCAGTTGCACCGGGCCATTTCGTGTTACGAGTCGGGTTTGAAGATCCAAATGGAGGCTATGAGCAACTCCGACCCAAGACTCGCAGAGACTTGCAGGTACGTAGCTGAAGCCCATGTTCAAGCTATGCAATTTGATGAGGCAATGAACTTCTGCAAAAAGGCTCTTGAAATTCACAGGGAGCATAGCTCTCCAGCTTCCCTTCCAGAGGCTGCCGATCGGCGACTTATGGCCCTCATTTGTGAGGCAAAGGGAGATTACGAATCAGCACTTGAGCACCTTGTCCTAGCTAGCATGTCAATGATTGCTAATGGGCAAGATAATGAGGTTGCAGCTATTGATGTTAGCATTGGTGATACTTACTTGTCACTCTGTCGTTTTGATGAGGCTGTCTTTGCCTACCAGAAAGCACTTACAGTGTTCAAATCCACTAGGAATGAAAATCACAGTTCTGTGGCATTAGTGTACATTCGCCTTGCTGACCTTTACTATAAGACAGGCAAACTACGAGAGTCAAAATCCTACTGCGAAAATGCCTTAAGAATATACTCCAAATCTGTGCCAGAAACTACTCCTGAAGAGATTGCCAGTGGGTTAACTGAAATATCTGCCATCTTTGAAGCTTTGAATGAGCCTGAGGAGGCACTGAAGCTCCTGCAGAAGTCAATGAAGCTATTGGAGGATAACCCTGGACAGTATAGGACTATAGCAGGAATAGAAGCACAAATGGCAGTGATGTTCTACATGATTGGGAGGTACTCAGAGGCTCGGAACTCTTTTGAGAGTGCTATCACTAAGCTGAGGGATGGTGGGGAGAGGAAATCTGCCTTTTTTGGAGTTTTATTGAATCAGATGGGCTTGGCTTGTGTGCAACTGTATAAAATAGGGGAAGCTGCCAAACTTTTTGAAGAAGCGAGAGAGATATTGGAGCAGGAGTGTGGAACATATCATTTGGACACTCTTGGGGTGTATAGCAATCTTGCGGCAACTTATGATGCCATGGGGAGGGTTGAAGATGCCATTGAGATATTAGAGCACATACTCAAGATGAGAGAAGAAAAGCTTGGAACTGCAAATCCGGATGTTGATGATGAAAAGAAAAGACTATATGAGCTTTTGAAAGAAGCTGGAAGAGTTCGGAATAAAAAGGGAAAATCACTTGAAAATCTCATAGATTCCAACTTTTTAAAGATGAAGAAGGAAGGAAGAAAGAGATGGACTGCATTTGGTTTGAGAATTTAG 1758 0.4699 MPGLVAVKTSPHTPPVTVGVFGTQGHDPTKNEYSNGGQRRTPSPLLNRTPSRISKKAPEKLIMDESSLDNPDLGPFLLKLARDTIASGENPNKALDYAIRASKSFERLSGSSLDLAMCLHVVAAIYSSLGRFGEAIHALERSIEFPDIGKGSDHAMAKFSGYMQLGDTYSMIGQLHRAISCYESGLKIQMEAMSNSDPRLAETCRYVAEAHVQAMQFDEAMNFCKKALEIHREHSSPASLPEAADRRLMALICEAKGDYESALEHLVLASMSMIANGQDNEVAAIDVSIGDTYLSLCRFDEAVFAYQKALTVFKSTRNENHSSVALVYIRLADLYYKTGKLRESKSYCENALRIYSKSVPETTPEEIASGLTEISAIFEALNEPEEALKLLQKSMKLLEDNPGQYRTIAGIEAQMAVMFYMIGRYSEARNSFESAITKLRDGGERKSAFFGVLLNQMGLACVQLYKIGEAAKLFEEAREILEQECGTYHLDTLGVYSNLAATYDAMGRVEDAIEILEHILKMREEKLGTANPDVDDEKKRLYELLKEAGRVRNKKGKSLENLIDSNFLKMKKEGRKRWTAFGLRI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0710 585 Gene3D Tetratricopeptide repeat domain 269 447 IPR011990 GO:0005515
Glsi07g0710 585 MobiDBLite consensus disorder prediction 1 53 - -
Glsi07g0710 585 Pfam MalT-like TPR region 107 269 IPR041617 -
Glsi07g0710 585 Pfam Tetratricopeptide repeat 282 356 - -
Glsi07g0710 585 Pfam Tetratricopeptide repeat 453 525 - -
Glsi07g0710 585 Gene3D Tetratricopeptide repeat domain 448 562 IPR011990 GO:0005515
Glsi07g0710 585 SMART tpr_5 201 234 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 116 149 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 409 442 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 493 526 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 325 358 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 451 484 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 283 316 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 368 401 IPR019734 GO:0005515
Glsi07g0710 585 SMART tpr_5 159 192 IPR019734 GO:0005515
Glsi07g0710 585 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 52 566 - -
Glsi07g0710 585 MobiDBLite consensus disorder prediction 27 50 - -
Glsi07g0710 585 ProSiteProfiles TPR repeat profile. 283 316 IPR019734 GO:0005515
Glsi07g0710 585 SUPERFAMILY TPR-like 116 529 IPR011990 GO:0005515
Glsi07g0710 585 Gene3D Tetratricopeptide repeat domain 59 268 IPR011990 GO:0005515
Glsi07g0710 585 ProSiteProfiles TPR repeat profile. 493 526 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0710 Glsi-ChrGlsi07 6253655 6257681 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0710 07 6253655 6257681 Glsi07g0710 07 6253655 6257681 ECH