Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0663 ATGTCGGTGTTAGCTATCAACGTTGAACTGTTTTATGAATGTAATAACAAAGGATCAGAGATGGCAGTGTTGACTGTTTCAAGCAATATAGTATCCAGAAGTTCTCCTGTTAATCATGGACCAACTGTTTCATCCGAGTCTAAAGTGGCTCCAATTGGACTTAGGTTTTTAAAGCTGACAAATACTCATAATGGACTGAGAATTTCAAACCCAGTGGATGAGCTGCTAGACAGAACCCCAATAAAAGCTAATGCAAGGCAAGCTAGGATGAAGGCACTTCAAAGCAAGGATGCTAGGCCTACAGGTATTATCATCTGTGGCATGAATTTGATCTTTGTGGGAACGGAGGTTGCTCCATGGAGCAAAACTGGCGGGCTTGGAGATGTTCTTGGAGGCCTGCCACCAGCAATGGCAGCTAATGGGCACCGTGTTATGACAATCACTCCACGTTATGACCAGTACAAAGATGCATGGGATACAAATGTCATAATTGAGGTAAAAGTAGGAGATAGGTTGGAAAAGGTTCGCTTCTTCCACTGTTACAGAAGAGGAGTTGATCGTGTTTTTGTGGATCATCCTATGTTCCTTGAAAAGGTGTGGGGAAAAAGTGGAACCAAACTTTATGGGCCTACCACAGGAGAGGATTACCAAGACAACGAACTACGGTTCAGCCTGTTCTGCCAGGCAGCTTTGGAAGCACCAAGAGTTCTGAATCTTAACAGCAGTAGTTATTTTTCTGGACCATATGGTGAAGATGTGATTTTTATCGCCAATGATTGGCACACTGCCCTGCTCCCCTGCTACTTGAAAACTATGTACCAGCCATTTGGCATCTTCAAGAATGCCCGAGTTGCCTTTTGTATCCACAACATTGCTTACCAAGGCAGATTTGCATTCGCTGACTTTTCACTTCTCAATCTCCCTGATCAATATAGAAGCTCCTTTGACTTCATTGATGGGCATGTTAAACCAGTGATGGGAAGGAAAATAAATTGGATGAAAGCTGGAATTTTAGAATCACACCTGGTGTTAACTGTTAGTCCATATTACGCCCAAGAACTTGTTTCTGGTGTTGATAAGGGAGTGGAGTTGGACAACATCCTTCGCAAAACTGGCATTATCGGAATTGTAAATGGCATGGACATCCAAGAGTGGAATCCATCCACTGACAAATATATAAACGTCAAATACGATGCTTCAAGTGTTATAGAAGCAAAGGCTCTTCTGAAAGAAGCCCTCCAAGCAGAAGTTGGATTGCCGGTAGACAGAAATGTTCCTCTTATTGGTTTCATTGGTAGGCTTGAAGAGCAGAAAGGTTCTGATATTCTTGTAGCTGCCATTCCCCAATTTATTGGAGAGAATGTTCAGATAGTTGCCCTTGGAACAGGTAAGAAACAAATGGAAAAACAGCTTCAGCAGCTGGAGACATTATACCCTGACAAGGCCATAGGAGTGGCAAAATTCAATGTTCCCCTGGCCCATATGATAATAGCTGGAGCTGATTATTTATTGGTTCCTAGCAGATTTGAACCTTGTGGTCTCATACAGTTGCAAGCCATGCGATATGGAACTGTACCTATAGTTGCCTCAACTGGTGGATTAGTTGACACAGTCAAAGAAGGTTTTACAGGATTTCAGATGGGTTCATTCAATGTTGAATGTGAAGCCCTGGATGCTGCGGATGTAGCTGCTCTGGCTAACAATGTCAAAAGGGCCCTTGGAGTTTATGGAACTCCAGCTTTTACAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAAGTGGGAGGAGACATTGCTTAGCTTGGGAGTCGCTGGCAGTGAACCTGGGATTGATGGAGAAGAAATTGCTCCACAATCAAAGGAAAATGTTGCAACTCCGTAA 1905 0.431 MSVLAINVELFYECNNKGSEMAVLTVSSNIVSRSSPVNHGPTVSSESKVAPIGLRFLKLTNTHNGLRISNPVDELLDRTPIKANARQARMKALQSKDARPTGIIICGMNLIFVGTEVAPWSKTGGLGDVLGGLPPAMAANGHRVMTITPRYDQYKDAWDTNVIIEVKVGDRLEKVRFFHCYRRGVDRVFVDHPMFLEKVWGKSGTKLYGPTTGEDYQDNELRFSLFCQAALEAPRVLNLNSSSYFSGPYGEDVIFIANDWHTALLPCYLKTMYQPFGIFKNARVAFCIHNIAYQGRFAFADFSLLNLPDQYRSSFDFIDGHVKPVMGRKINWMKAGILESHLVLTVSPYYAQELVSGVDKGVELDNILRKTGIIGIVNGMDIQEWNPSTDKYINVKYDASSVIEAKALLKEALQAEVGLPVDRNVPLIGFIGRLEEQKGSDILVAAIPQFIGENVQIVALGTGKKQMEKQLQQLETLYPDKAIGVAKFNVPLAHMIIAGADYLLVPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECEALDAADVAALANNVKRALGVYGTPAFTEMIKNCMAQDLSWKGPAKKWEETLLSLGVAGSEPGIDGEEIAPQSKENVATP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0663 634 Gene3D Glycogen Phosphorylase B; 110 600 - -
Glsi07g0663 634 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 89 613 - -
Glsi07g0663 634 Pfam Starch synthase catalytic domain 110 370 IPR013534 -
Glsi07g0663 634 NCBIfam glycogen/starch synthase, ADP-glucose type 108 606 IPR011835 GO:0004373
Glsi07g0663 634 FunFam Starch synthase, chloroplastic/amyloplastic 109 385 - -
Glsi07g0663 634 CDD GT5_Glycogen_synthase_DULL1-like 109 604 - -
Glsi07g0663 634 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 103 604 - -
Glsi07g0663 634 Pfam Glycosyl transferases group 1 423 547 IPR001296 GO:0016757
Glsi07g0663 634 Gene3D Glycogen Phosphorylase B; 381 591 - -
Glsi07g0663 634 MobiDBLite consensus disorder prediction 612 634 - -
Glsi07g0663 634 FunFam Starch synthase, chloroplastic/amyloplastic 386 591 - -
Glsi07g0663 634 Hamap Glycogen synthase [glgA]. 108 609 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0663 Glsi-ChrGlsi07 5820894 5824662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0663 21 634 Glycosyltransferase AT1G32900 70.178 0.0 872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0663 07 5820894 5824662 Glsi07g0663 07 5820894 5824662 ECH