Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0661 ATGCAGTGTCAGATACCCCCACTCCCAACGCTCAAGACGGTTATTGCCACATCCCTTTCTCTCGTTTCCTCCGCCCCTTCTTTCCCTCTTTCCTATGCTACAACACTTCTTCCTTTTTCCTTCACTCGTCAAAAGGCCAAGAGGCAACCCACATTTCTCTCTTCCCTTTTTCAGCTCCGTTGCTGCTTGCTACCAACAAAAATGTCTTTTTCTGCAGCCAAGTTTGCGCAACCTCTCCCTCTCAATTCCACCACTGCCAGATCCAATGACAAGCCTCTGTCTTTTGATCCCTTCAGGGCTAGCTCCTCTTTTCTTGGATCCACACACAAGCTTCGCTTCAATGCTCTCTGTAAGATTCCTCGGCACAATCCCCACCCTCGACTCGCTGTAGTTGCTGTATCTGATGTTGTCAAGCAAAAGAAGCTCAAATCAAGCACCAATCTGCTTATTACGAAAGAAGAAGGATTGGAGCTATACGAAGACATGATATTAGGCAGGGCCTTTGAAGACATGTGTGCTCAGATGTATTATAGAGGCAAAATGTTTGGTTTTGTCCACTTGTATAATGGCCAAGAAGCCGTGTCAACTGGATTCATCAAGCTTCTGAAGAAAGACGATTATGTAGTAAGCACTTACCGGGACCATGTTCATGCACTGAGTAAGGGGGTCCCGGCTCGTGCTGTGATGAGTGAGCTCTTTGGAAAGGCGACTGGATGCTGCCGTGGTCAAGGTGGTTCAATGCATATGTTCTCAAAAGAACACAATATGCTTGGTGGGTTTGCATTCATTGGTGAAGGGATTCCAATAGCCACGGGAGCAGCATTTTCAAGTAAGTATAGAAGGGAGGTATTGAAAGAGGCAGAGGCTGATAATGTCACATTGGCATTTTTTGGAGATGGGACTTGTAATAATGGACAATTCTTTGAATGCCTAAACATGGCGGCTCTGTGGAAATTGCCAATTGTGTTTGTGGTGGAAAACAATTTGTGGGCTATTGGGATGTCACATCTCAGGGCAACTTCAGATCCTGAGATTTGGAAGAAAGGACCAGCATTTGGAATGCCAGGGGTTCATGTAGATGGAATGGATGTTTTGAAGGTCAGAGAGGTGGCAAAGGAGGCGATTGAGAGAGCTAGAAGGGGAGAGGGACCAACTTTAGTGGAATGTGAGACCTATAGATTTAGAGGACACTCATTGGCTGATCCTGATGAGCTTCGTGACCCTGCTGAGAAGGCACACTATGCTGGTAGGGATCCCATCTCTGCATTGAAAAAATACATGATTGAGAACAAACTAGCCAGTGAACAAGAGTTGAAGGCCATAGAGAAGAAGATTGATGAGGTCATTGAGGACTCTGTTGAGTTTGCTGACGACAGCCCTCTTCCACCCCGCAGCCAGCTTCTGGAGAATGTCTTTGCTGATCCAAAAGGTTTTGGAATTGGACCAGATGGCAGGTATAGATGTGAGGATCCAAAATTCACTGAAGGCACCGCTCATGTTTAG 1503 0.4617 MQCQIPPLPTLKTVIATSLSLVSSAPSFPLSYATTLLPFSFTRQKAKRQPTFLSSLFQLRCCLLPTKMSFSAAKFAQPLPLNSTTARSNDKPLSFDPFRASSSFLGSTHKLRFNALCKIPRHNPHPRLAVVAVSDVVKQKKLKSSTNLLITKEEGLELYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKDDYVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPIATGAAFSSKYRREVLKEAEADNVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPISALKKYMIENKLASEQELKAIEKKIDEVIEDSVEFADDSPLPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0661 500 CDD TPP_E1_PDC_ADC_BCADC 158 456 - -
Glsi07g0661 500 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 152 473 IPR017597 GO:0004739|GO:0006086|GO:0043231
Glsi07g0661 500 Gene3D - 109 481 - -
Glsi07g0661 500 FunFam Pyruvate dehydrogenase E1 component subunit alpha 122 481 - -
Glsi07g0661 500 Coils Coil 431 451 - -
Glsi07g0661 500 Pfam Dehydrogenase E1 component 162 462 IPR001017 GO:0016624
Glsi07g0661 500 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 133 483 - -
Glsi07g0661 500 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 147 475 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0661 Glsi-ChrGlsi07 5814984 5818149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0661 69 500 Acyl Lipid Metabolism Gene Families AT1G01090 79.861 0.0 710
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0661 07 5814984 5818149 Glsi07g0661 07 5814984 5818149 ECH