Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0611 ATGCGGAAATTCGTTACAGAGAGAGTCAGGAGCCTCCTGAGCCGTTCCTTTCAGCATCACCGCCGTTCCCTTTCCTCTCCATTATTTCAGTCACGTTTCTTGTCTCCTACTCCCGCTCTTGATTTTCATTCTTCTTCAATGGCTTCCTCTCCTTCTGATCCCTCCTTCCCCGTGAATACCCAAAACATCAATCCAAAGGTTCTAAAATGTGAGTATGCTGTCCGAGGAGAGATCGTCACTCTTGCCCAGAACTTGCAACAAGAGTTACAGGCCAGCCCAGGCTCTCATCCATTTGACGAGATACTTTACTGCAACATTGGGAATCCTCAGTCTCTTGGTCAGCAACCAATAACTTTTTTTCGAGAGGTTCTTGCTTTATGTGACCATCCAGCCATTTTGGACAGAAGTGAAACTCAGGGTCTGTTCAGTGCTGATGCAATTGAGCGAGCCTGGCAGATTCTAGATCAGATTCCTGGGAGGGCAACTGGTGCGTATAGTCATAGTCAGGGTATTAAGGGCCTCCGTGATACAATAGCTGCTGGAATTGAAGCCCGTGATGGTTTCCCTGCTGATCCCAATGACATTTTCTTGACTGATGGTGCAAGCCCAGCGGTCCATATGATGATGCAATTACTCATAAGATCAGAAAATGATGGTATACTTTGTCCCATCCCTCAATACCCTCTGTACTCAGCTTCAATTACCCTCCATGGTGGCAACTTGGTACCTTATTATCTTGATGAAGCAACTGGTTGGGGGTTGGAAATATCTGAGCTCAAGAACCAACTGGAGTCTGCCAAGTTGAAGGGCATCACTGTTAGGGCTTTGGTTGTAATAAATCCAGGAAACCCAACCGGGCAGGTTCTTTCTGAGGAAAACCAGAGGGCTATTGTACAATTTTGCAAGCAAGAGGGTCTGGTTCTTCTGGCTGATGAGGTATATCAAGAAAACGTCTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGATATCTCCTTGGTATCTTTTCAATCGGTCTCAAAAGGCTATTATGGGGAATGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGGTTTTCTGCACCTGTGAGGGAACAGATATACAAAGTGTCATCTGTGAATCTTTGTTCTAATATCTCCGGTCAAATTCTTGCAAGTTTGGTCATGAGCCCACCTAAGAATGGAGATGAGTCATATGAATCGCACTGTGCGGAGAGAGATGGAATTTTGTCATCCCTTGCTAAGCGTGCAAAGACGCTGGAAGAAGCATTTAACAATTTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTATTTCCCCAAATTTGCCTGCCCGAAAAAGCAATCAAAGCAGCGGAGGCAGCAAATAAAGCAGCTGATGCCTTCTACTGTCAAAGCCTGCTTAATGCCACAGGAATTGTTGTTGTACCTGGTTCTGGTTTTGGACAGGTTCCTGGGACCTGGCATTTTAGGTGTACCATACTGCCTCAAGAAGATAAGATTCCAGCCATTGTCTCCCGCTTGACAGAGTTCCATAAAAAATTCATGGATGAGTTTCGTGACTAA 1608 0.4521 MRKFVTERVRSLLSRSFQHHRRSLSSPLFQSRFLSPTPALDFHSSSMASSPSDPSFPVNTQNINPKVLKCEYAVRGEIVTLAQNLQQELQASPGSHPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPAILDRSETQGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASITLHGGNLVPYYLDEATGWGLEISELKNQLESAKLKGITVRALVVINPGNPTGQVLSEENQRAIVQFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAPVREQIYKVSSVNLCSNISGQILASLVMSPPKNGDESYESHCAERDGILSSLAKRAKTLEEAFNNLEGVTCNKAEGAMYLFPQICLPEKAIKAAEAANKAADAFYCQSLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKKFMDEFRD 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0611 535 SUPERFAMILY PLP-dependent transferases 60 529 IPR015424 -
Glsi07g0611 535 Gene3D - 163 409 IPR015421 GO:0003824
Glsi07g0611 535 Pfam Aminotransferase class I and II 160 508 IPR004839 GO:0009058|GO:0030170
Glsi07g0611 535 PANTHER ALANINE AMINOTRANSFERASE 55 534 IPR045088 GO:0008483
Glsi07g0611 535 Gene3D Aspartate Aminotransferase, domain 1 61 533 IPR015422 GO:0003824
Glsi07g0611 535 Coils Coil 421 441 - -
Glsi07g0611 535 Gene3D - 112 162 - -
Glsi07g0611 535 FunFam alanine aminotransferase 1 397 535 - -
Glsi07g0611 535 FunFam Alanine aminotransferase 2 112 162 - -
Glsi07g0611 535 CDD AAT_like 148 524 - -
Glsi07g0611 535 FunFam alanine aminotransferase 2 163 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0611 Glsi-ChrGlsi07 5394359 5400484 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0611 07 5394359 5400484 Glsi07g0611 07 5394359 5400484 ECH