Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0608 ATGGATGCTCAAGCTTTCTCTGACATTTTCAACATCATCAAGTCATGGATTCCCTGGCGATCTGAGCCAGCAAATGTGTCCAAGGATTTTTGGATGCCTGACCAGAGTTGTCGGGTATGCTACGATTGTGATTCCCACTTCACCTTATTTAATCGCAGACACCATTGTCGACATTGTGGCCGAGTTTTCTGTGCCAAGTGCACATCAAACTCAGTTCCTGCCCCATCTAGCTGCCAAAGAAATTCTTTGGATGAGAGAGAAAAGATTCGGGTATGCAATTTTTGTTACAAGCAATGGGAGCAGGGCATAGCTACTTGTGATAACAGAATAACGGTCCCCAATCTGGATCAGAGTTCTTTACTATCCATTTCAAGCTTGGCCAGCAGTAAATCCTGTGGCACTGCTAATAGTAGCAACATTACTCTATGCTCCGTACCTTATTCAGTTGGAGCTTATCAACAAGTGCAACAGGGCTCTAGTCTGGGCCTGCATCAATCATCTATGAGGGAAAAAGGCATTGGTAGCGAAGTTATATCAGCACTTAGAAGGAACGATGATCTTGTGACAGACCTAGGGGATCCCTCGCCAAAGCAATACAGTTACTCAATGAACAGGAGTGACAATGACGAGGATGAGTACGGTGTATATCAGTCAGATTCTGAAATGAGGCATTATCCTGGAGTGAATGGCTACTATAGTCAAGCTGAATTTGATGGAATTCATAACATTGATGGATCACAGTTGCATCCTGATGGAGAAAATTTCAATACAGAAGTTTTGTGCAACTCTACAAAACCCCAAAGTTTTGACACACAGGGTTTGGAAGAAATCCCGACTATCAGAAGAAATGAAGATGAACCTGATATCTTTGATGGAAGCGAAGCACCTTCTTCTTTATATGTTTCAGAGGACAATGATGCTGAACCTGTAGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCTGAAGATGAAGAAGATGAAAGAGAAGCTAATTTTTTTGATGATGATGATGATGATGATGAAGGGAATGACATAGGAGAGTGGGGGTATTTACGAACATCAAGCAGTTTCGGAGGTGGGGAGTACCGCAACAGAGATAGGTCAAGTGAGGAGCAGAAGGCCACGAAGAATGTAGTTGATGGGCATTTTAGGGCTCTGGTAGCTCAGCTGTTACTAGTTGAAAACCTACCTGTCGAAGACAATCACAAAAACAATTGGTTGGAGATTATCACATCTCTGTCATGGGAGGCTGCTACATTATTGAAACCAGACATGAGCCAAGGTGGAGGGATGGACCCAGGTGGATATGTGAAAGTCAAATGCATAGCATGTGGGAGCCATAGTGAAAGCGTGGTAGTTAAGGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGACATCAAAAGTTGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTCGAGTATCAGCGTGTTACCAACCTCTTGTCTAGTGTGGATACTCTGTTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTGCACACCATCCTGATGTCCTTTTGGTAGAGAAATCAGTTTCTCGATATGCACAGGAATACCTTCTTGCAAAAGGCATATCTTTGGTTCTCAATGTCAAGAGGCCACTTTTGGAGCGTATAGCACGCTGCACTGGAACTCAAATAGCACCTTCAATTGATCATCTCTCATCACAAAAGTTGGGCTATTGTGAGACATTTCATGTGGAAAAGTTTATTGAAGATCTAAGTAGTGCTGGTCCTGGAGGGAAAAAAACAGTGAAGACATTGATGTATTTTGAAGGCTGCCCAAAGCCATTGGGTTTCACGATTTTACTTAGAGGGGCTGATAAGGATGAATTGAAGAAGGTAAAGCACGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCCCTGGAGACATCTTTTCTTGCTGATGAAAGAGCCTCGCTGCCAGATTTTTCTTTGAATTCTCCAATAACGGTGGCCCTTCCAGATAAGTCATCAAGCATCGAGAGGTCCATCTCAACAGTGCCTGGTTTCAGCATTCCTGGAAATGAAAAGTCTCAGGGACCTGAACCTGGCACTGAACTACAGAGAGCCAAAAGTATCTCACTTGCTGATCTATCCTCATTACCAAGAAGTAATGAAACCTGTTTGTTTAATGGTCCTTATCAACCTATGCAACCTGGTTTAAGTCTCAGCCATTCAACTACCTTTTACACCTCTGCTGTTTCTTCATTAAATGCAATTTCCGATTCATATTATAAGAAGCTTCTTCCTTATACTAGTAAAGAAAGAAATACAATGGATTCCAACAAATCTCCAGTGCCAGAAACTTTTCTAGTGAACAACTCTCTGGCAGTCATGGATAAGCATCCATCTGTAAATGACTGTGGGACTTCTGAGAAATCGGATCAAGGAATTTTGGCTGACACTCCTCAAAACATTCACAGCCAAATTCCTACAAAAGTACTAAGTGCTTCAGAGTTGTTAACTTCAGAAGTTGATCAAAACCATTCCAAAGAGACAGGAGCCATGAATGAAGAGCCAGTACCTCTAAAAGAAGAGTTTCCTCCATCGCCCTCTGACCATCAAAGCATTCTGGTATCTTTGTCCTCTCGATGCGTTTGGAAAGGAACTGTGTGTGAGAGGTCCCATCTCTTTCGTATTAAATATTATGGCAGCTTTGATAAACCTTTGGGTCGGTTTTTGCGGGACCATTTATTTGATCAGAATTATCAATGCAATTCTTGTGAAATGCCATCAGAAGCACATGTGCATTGTTATACTCATCGACAGGGGACCCTCACTATATCAGTTAAGAAACTACCAGAAATTCTTCTACCTGGTGAAAAGGAGGGAAAGATCTGGATGTGGCATAGATGCCTGAGGTGTCCAAGAATAAATGGTTTTCCTCCTGCTACACACAGAATAATAATGTCTGACGCTGCCTGGGGCTTATCATTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCGAGCAGGGTGGCAAGCTGTGGCCATTCTTTACATAGGGATTGTCTTCGTTTTTATGGATTTGGGAATATGGTTGCTTGTTTTCGGTATGCATCAATTGATGTTCACACAGTCTACCTTCCCCCACACAAACTGGATTTTAATTATGGAAATCAGGAGTGGATGCAAAGAGAATCAGATGAGGTCGTTAACCGAGCAGAGCTTTTATTTTCTGAGGTACTCAACGCTCTTGGCCAAATTGGAGAGAATAGAACTAGCACAGTGCCAGTTAGTGGTGGACTTGAAACAACTGACACGAGGCGCCAAGTTGCTGAACTGGAGGGAATGTTGCAAAGGGAGAAGGTGGAGTTTGAGGAAGCACTTCAAAAGGTTTTGAACCAGGAAAAGAGAAAGGGCCAACTTGGGGTTGACATTCTGGAAATTAATCGATTGCGGAGGCAGTTACTTTTCCAATCATATATGTGGGACCACCGCCTTATCTATGCAGCCACCTCAGTTAATTCTAGTAACCAAAGTGTTTCAAGAAGTTCAATTTCAGAGAACAAGGAGAGACCCGTGGATGAAAAACTGATCAGTGCGGTGTCCATGCCAGAACGAGGCTTCAATAGTAATGGCTCTATTCTTATGGATTCAAAGCTTAACAACCTTGATCTGGGAGTAGGAGAAGGACTTGATACCAACATTTCCCAATCTGATTTATTTTATCAAGAAATTGACATGGGAAAAGATACAAAACATGAGAAAGAGGATCAATCTGACCCTTCAAAACCTGGGTTATGCATTCGCAGGGCTCACTCTGATGGGCTGTTTCCGGTCATGCCTAGTTTGTCTGATACCCTTGATGCAAAATGGACGGGTGAAAACCAATCAGGGTTTGGAATACCAAAGGAAAACACTTCTATAACTCTTGATGCATTTAAGGCAGATTCTTTGACTGCTACTATGCAGAGAGAAGCTTCCAATCTAGGTAATCCTGCAGAAGACCAAAATGGCCCCAAGAGTATCTATCCTGCTTCTAAGGGCCATGATAATAACATGGAAGACTCCTTAAGGTGGTTAAGAATGCCATTCTTAAACTTCTATCGCTCATTTAACAAGAACTTTTTAGCCAGTACACAAAAATTTGATACTTTAGTTGACTACAATCCTGTTTACGTATCATCCTTCCGGGAGATGGAACTCCAAGGTGGAGCAAGGCTGCTTCTGCCAATTGGTGTTAATGACACTGTAATACCAGTAATTGATGATGAACCCTCAAGTATTATATCTTATGCCTTAATGTCACCAGAATATCATGTCCAATTGACTGATGAAGGAGAGAGAACGAAAGATGGAGTTGATTCAATGTCTTCATTATATTTTTCTGACTCGGGAAATTACCATTCGTTCCTAACCACTGATGAAACAGCTTTTGATTCTCAAAAAAGCTTTGGGTCATCAGAGGATATGTTATCATCCTTGTCTGGATCTCGTAACTCATGGATGTTGGACCCACTAATGTATACGAAGGCTATGCATGTCAGAGTTTCCTTTGGAGAAGACGGTCCCCTTGGTAAAGTGAACTATTCTGTGACTTGTTATTACGCCATGCGGTTTGAAGCCTTAAGAAGGGTTTGCTGTCCTTCGGAACTTGACTATGTGAGGTCTCTGAGTCGCTGTAAAAAATGGGGAGCTCAAGGTGGAAAGAGTAATGTATTCTTTGCAAAAACCTTGGATGATCGATTTATCATCAAACAAGTGACCAAAACAGAGCTTGAATCATTTATTAAATTTGGTCCTGAATACTTCAGGTACCTTTCTGAATCAATAGGCTCAGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGGATTTACCAGGTTACAGTGAAGCATCTTAAAGGAGGGAAAGAATCAAGGATAGATGTCCTGGTTATGGAGAATCTTTTATTTAAGAGAGATGTGACACGACTTTATGATCTCAAAGGATCTTCCAGGTCTCGGTATAATCCGGATTCTAGTGGGAGTAACAAAGTTCTGCTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCCATTTTTGTGGGAAATAAAGCAAAACGGTTGTTAGAAAGAGCTGTCTGGAATGATACTGCTTTTCTTGCATCCGTCGGCGTAATGGACTATTCCTTACTTGTTGGGGTGGATGAAAAGAAGCATGAGTTAGTTATTGGAATCATTGATTTCATGAGGCAGTATACGTGGGACAAACATCTTGAAACATGGGTTAAAGCTTCTGGCATCCTTGGAGGACCAAAGAACTCGTCTCCTACTGTAATATCACCCAAGCAATACAAAAAAAGGTTCCGGAAAGCAATGACCGCCTACTTTCTCATGCTTCCAGATCAGTGGTCTCCTCCATCTATTGTTGTTAGTAAATCCCAGTCTGATTTATGTGAAGAGAACACACAATCTACTTTTGCTGAATGA 5487 0.4206 MDAQAFSDIFNIIKSWIPWRSEPANVSKDFWMPDQSCRVCYDCDSHFTLFNRRHHCRHCGRVFCAKCTSNSVPAPSSCQRNSLDEREKIRVCNFCYKQWEQGIATCDNRITVPNLDQSSLLSISSLASSKSCGTANSSNITLCSVPYSVGAYQQVQQGSSLGLHQSSMREKGIGSEVISALRRNDDLVTDLGDPSPKQYSYSMNRSDNDEDEYGVYQSDSEMRHYPGVNGYYSQAEFDGIHNIDGSQLHPDGENFNTEVLCNSTKPQSFDTQGLEEIPTIRRNEDEPDIFDGSEAPSSLYVSEDNDAEPVDFENNGLLWLPPEPEDEEDEREANFFDDDDDDDEGNDIGEWGYLRTSSSFGGGEYRNRDRSSEEQKATKNVVDGHFRALVAQLLLVENLPVEDNHKNNWLEIITSLSWEAATLLKPDMSQGGGMDPGGYVKVKCIACGSHSESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIAAHHPDVLLVEKSVSRYAQEYLLAKGISLVLNVKRPLLERIARCTGTQIAPSIDHLSSQKLGYCETFHVEKFIEDLSSAGPGGKKTVKTLMYFEGCPKPLGFTILLRGADKDELKKVKHVVQYGVFAAYHLALETSFLADERASLPDFSLNSPITVALPDKSSSIERSISTVPGFSIPGNEKSQGPEPGTELQRAKSISLADLSSLPRSNETCLFNGPYQPMQPGLSLSHSTTFYTSAVSSLNAISDSYYKKLLPYTSKERNTMDSNKSPVPETFLVNNSLAVMDKHPSVNDCGTSEKSDQGILADTPQNIHSQIPTKVLSASELLTSEVDQNHSKETGAMNEEPVPLKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQNYQCNSCEMPSEAHVHCYTHRQGTLTISVKKLPEILLPGEKEGKIWMWHRCLRCPRINGFPPATHRIIMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGNMVACFRYASIDVHTVYLPPHKLDFNYGNQEWMQRESDEVVNRAELLFSEVLNALGQIGENRTSTVPVSGGLETTDTRRQVAELEGMLQREKVEFEEALQKVLNQEKRKGQLGVDILEINRLRRQLLFQSYMWDHRLIYAATSVNSSNQSVSRSSISENKERPVDEKLISAVSMPERGFNSNGSILMDSKLNNLDLGVGEGLDTNISQSDLFYQEIDMGKDTKHEKEDQSDPSKPGLCIRRAHSDGLFPVMPSLSDTLDAKWTGENQSGFGIPKENTSITLDAFKADSLTATMQREASNLGNPAEDQNGPKSIYPASKGHDNNMEDSLRWLRMPFLNFYRSFNKNFLASTQKFDTLVDYNPVYVSSFREMELQGGARLLLPIGVNDTVIPVIDDEPSSIISYALMSPEYHVQLTDEGERTKDGVDSMSSLYFSDSGNYHSFLTTDETAFDSQKSFGSSEDMLSSLSGSRNSWMLDPLMYTKAMHVRVSFGEDGPLGKVNYSVTCYYAMRFEALRRVCCPSELDYVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFRYLSESIGSGSPTCLAKILGIYQVTVKHLKGGKESRIDVLVMENLLFKRDVTRLYDLKGSSRSRYNPDSSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASVGVMDYSLLVGVDEKKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNSSPTVISPKQYKKRFRKAMTAYFLMLPDQWSPPSIVVSKSQSDLCEENTQSTFAE 1828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0608 1828 CDD Fab1_TCP 387 658 - -
Glsi07g0608 1828 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 20 1810 - -
Glsi07g0608 1828 MobiDBLite consensus disorder prediction 1255 1269 - -
Glsi07g0608 1828 Gene3D - 1655 1797 - -
Glsi07g0608 1828 MobiDBLite consensus disorder prediction 1255 1274 - -
Glsi07g0608 1828 MobiDBLite consensus disorder prediction 322 347 - -
Glsi07g0608 1828 SUPERFAMILY SAICAR synthase-like 1527 1796 - -
Glsi07g0608 1828 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1480 1796 IPR002498 GO:0016307|GO:0046488
Glsi07g0608 1828 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 34 100 IPR017455 -
Glsi07g0608 1828 SMART fyve_4 26 101 IPR000306 GO:0046872
Glsi07g0608 1828 MobiDBLite consensus disorder prediction 688 710 - -
Glsi07g0608 1828 SUPERFAMILY FYVE/PHD zinc finger 29 102 IPR011011 -
Glsi07g0608 1828 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1498 1653 - -
Glsi07g0608 1828 Gene3D GroEL 451 624 IPR027409 -
Glsi07g0608 1828 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1494 1653 IPR027484 -
Glsi07g0608 1828 SMART PIPK_2 1506 1797 IPR002498 GO:0016307|GO:0046488
Glsi07g0608 1828 Pfam TCP-1/cpn60 chaperonin family 406 646 IPR002423 GO:0005524
Glsi07g0608 1828 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 451 624 - -
Glsi07g0608 1828 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1572 1738 IPR002498 GO:0016307|GO:0046488
Glsi07g0608 1828 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 104 IPR013083 -
Glsi07g0608 1828 MobiDBLite consensus disorder prediction 845 871 - -
Glsi07g0608 1828 CDD PIPKc_PIKfyve 1533 1796 IPR044769 GO:0000285
Glsi07g0608 1828 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 22 107 - -
Glsi07g0608 1828 Coils Coil 1116 1143 - -
Glsi07g0608 1828 Pfam FYVE zinc finger 31 99 IPR000306 GO:0046872
Glsi07g0608 1828 SUPERFAMILY GroEL apical domain-like 452 624 IPR027409 -
Glsi07g0608 1828 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1655 1797 - -
Glsi07g0608 1828 MobiDBLite consensus disorder prediction 311 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0608 Glsi-ChrGlsi07 5369410 5378700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0608 4 1824 EF-hand Containing Proteins AT3G14270 60.604 0.0 2069
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0608 07 5369410 5378700 Glsi07g0608 07 5369410 5378700 ECH