Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0585 ATGAGCAGGGCCGCGGATTCATTCAACGGTGATTTGACAGCTGCCGTGAACAGTCTGTTCAATATTCCCGAAACCATGGAGAAATTCATGTTTCAACATCGGGCTCACGACACCCATGAGATCAGAGGTGTGTCTAATATCCCTGTGGACATTTTGGACACTCCCAAGGAGTACATATTTTACATGGACGTCCCTGGTCTCTCCAAATCTGACATTCAGGTAACAGTGGAAGATGAAAACGCACTGGTGGTTCGAAGCAATGGGAAGAGGAAACGGGAAGATGGCGAGGATGAAGGCTGCAAATACCTAAGGCTAGAGAGGAGAGCGCCCCAGAAGCTGTTGAGGAAGTTCCGTTTGCCTGAGAATGCAAATGTATCAGCCATTTCTGCGAAATGTGAGAATGGGGTTCTGACTGTTGTTGTTGAGAAGCACCCTCCACCTCCAAAATCCAAGACAGTTGAAGTCACCATTGCCTGA 477 0.4801 MSRAADSFNGDLTAAVNSLFNIPETMEKFMFQHRAHDTHEIRGVSNIPVDILDTPKEYIFYMDVPGLSKSDIQVTVEDENALVVRSNGKRKREDGEDEGCKYLRLERRAPQKLLRKFRLPENANVSAISAKCENGVLTVVVEKHPPPPKSKTVEVTIA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0585 158 Gene3D - 8 157 IPR008978 -
Glsi07g0585 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 155 IPR031107 -
Glsi07g0585 158 SUPERFAMILY HSP20-like chaperones 20 152 IPR008978 -
Glsi07g0585 158 FunFam 17.4 kDa class III heat shock protein isoform A 9 156 - -
Glsi07g0585 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 40 158 IPR002068 -
Glsi07g0585 158 CDD ACD_sHsps-like 50 143 - -
Glsi07g0585 158 Pfam Hsp20/alpha crystallin family 50 155 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0585 Glsi-ChrGlsi07 5130263 5131336 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0585 07 5130263 5131336 Glsi07g0585 07 5130263 5131336 ECH