Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0550 ATGGCCCTTGCAAAAGAAATTATGGGTTCTTCATTGATGGAGAGGTCTTTATTTGTTTCTTCCTCAAAAGTGCTTCTTAGTCGTAGTTTTCAGAACAAGCCGAGCCAGTTCTTGGTCAGCCCTTTTGTGGCTCCTTTGGAGAATAGAAGAGTAGCGAGGTTGAGAAAGGCTGTGAAAAATCCTGTGGCTGCTATTAGTGAGGATTTGGTGAAGGCTTCTTCTGTGCCTGCAGAGAAAGCAGTGAGATTCAAGGTTAGAGCTGTAGTGACTGTTAGGAACAAGATCAAAGAGGATTTTAAAGAAACCATTGTGAAGCATTTGGATGCCATCACTGACAGGATAGGAAGAAACGTTGTTTTGGAACTTTTCAGCACTGAGATAGACCCAAAAACGAAAGCCCCGAAGAAGAGCAATGAAGCTGTGCTAAAGGATTGGTCAAAGAAATCCAATGTTAAAGCAGAAAGAGTTAATTACACAGCTGAGTTTACCGTGGACTCCGATTTTGGGGTGCCCGGAGCCGTTACTGTGACAAACAAACACCAGAAAGAGTTTTTCATGGAAACTATAACCATCGAAGGCTTTGCCTGTGGTCCAGTTCATTTCCCCTGCAACTCATGGGTACAACCCAGGAAAGATCATCCTGGAAAGAGGATATTCTTTTCCAATAAGCCATATCTACCCAGTGAGACACCTGCTGGACTTAGATTATTGAGGGAGAGGGAGATGAGAAATCTAAGAGGTGATGGCAAAGGAGTTAGAAAATTATCTGACAGAATATATGATTTTTCAACATATAACGATCTGGGAAATCCGGATAAAGGGATTGATCTAACCAGACCAACTCTTGGAGGATCAGAAAAGTATCCATACCCAAGACGATGTCGTACTGGTCGCGCACCAAGTGATACAGATATGCATGCAGAGAGCCGTGTGGAGAAGCCATTGCCTATGTATGTACCCAGAGATGAACATTTTGAGGAATCTAAGCAGAACACATTCACTGTTATGAGGCTCAAGGCAGTACTGCATAACTTGATCCCTGGGTTAAAGGCTAACTTGTCGGCTAATAACCAAGACTTTAATGAATTCTCAGACGTTGATGGCCTTTACAGTGAGGGGCTCCTCATTAAATTTGGATTGCAAGATGATGTTTTGAAGAAACTCCCGTTGCCAAAGTTCGTCAGCAAGATCCAAGAATCCAGCCAGGGGCTTCTCAAGTATGACACCCCAAAGATTATCTCCAAGGACAAGTTTGCTTGGTTGCGAGATGACGAATTTGCCCGCCAAGCCATTGCAGGAATCAATCCTGTTAATATTGAGAAGCTTCAAGTTTTCCCACCTGTCAGCAAGCTTGACCCTGAAGTGTATGGTCCCCTAGAGTCTGCCCTTAAAGAGGAACACATTTTAGGCCAACTCAATGGCATGACTATTCAACAGGCAATAGATGAAAATAAGCTGTTTATCATAGACTACCATGATATCTACCTTCCATTTCTTGATGGGATCAATGCCCTTGATGGTAGAAAATCCTATGCTACACGTACCATCTTTTTCTTGACACCCCTTGGCACTCTCAAGCCTATTGCTATAGAACTTAGTCTCCCACCTGCCGGACCAAGTTCCCGATCAAAGCGTGTACTCACTCCTCCGGTTGATGCTACTACAACTTGGATGTGGCAACTTGCCAAGGCTCATGTTTGTTCCAACGATGCTGGTGCACATCAACTTGTTAACCATTGGCTTCGCACACATGCCTGCATGGAGCCGTTTATACTGTCTGCACATAGGCAATTAAGTGCAATGCATCCTATTTTTAAGCTATTGGACCCTCATATGAGGTACACTTTGGAGATCAATGCCTTAGCTCGCCAAGGCCTCATCAATGCCGACGGAATCATTGAGTCTTGCTTTACTCCTGGCCGCTACTGCATGGAGATCAGTTCTGCTGCTTACAAAAATTTCTGGCGCTTTGACATGGAGGGCCTCCCTGCTGATCTCATCCGGAGGGGAATAGCAGTACCTGACCCCACACAACCCTATGGTCTAAAGCTCCTGATAGAAGATTACCCTTATGCCACTGATGGTCTTATGATCTGGTCTGCAATTGAGGACTGGGTCCGCACCTATGTGAACCATTACTACCCAAACTCTAGCCTTATTTGTGATGACAAAGAGCTACAAGCTTGGTACTCTGAGTCAATCAATGTGGGCCATGCTGATCTCAGACATGAAAGCTGGTGGCCCACACTGAACAGTAGTGATGACCTTGTTTCCATCCTCACAACCTTGATCTGGCTTGCATCAGCACAACATGCAGCGCTTAATTTTGGGCAGTACCCTTATGGAGGGTATGTGCCAAACCGTCCACCATTGATGAGAAGACTAATCCCAGAAGAGAGTGACCCAGAATATGCCATTTTCCTAGCTGACCCACAAAAGTATTTCCTAAACTCATTGCCTAGTTTGTTGCAAGCTACAAAATTCATGGCCGTAGTTGACACTCTCTCCACTCACTCCCCGGACGAGGAGTACCTCGGAGAGCGGAACCAACCGTCGACTTGGTCTGGCGACCCCGAGATCGTTGAGGCATTCTATGGGTTCTCGGCCGAGATTAGACAAATAGAGAAGGAGATTGATAATAGGAACTGTGATAGGACACTAAGGAATCGATGTGGGGCAGGAGTTTTACCTTATGAGTTACTTGCTCCTAGCTCAGAACCTGGCGTTACATGCAGAGGGGTACCAAATAGTGTGTCCACGTAA 2763 0.4524 MALAKEIMGSSLMERSLFVSSSKVLLSRSFQNKPSQFLVSPFVAPLENRRVARLRKAVKNPVAAISEDLVKASSVPAEKAVRFKVRAVVTVRNKIKEDFKETIVKHLDAITDRIGRNVVLELFSTEIDPKTKAPKKSNEAVLKDWSKKSNVKAERVNYTAEFTVDSDFGVPGAVTVTNKHQKEFFMETITIEGFACGPVHFPCNSWVQPRKDHPGKRIFFSNKPYLPSETPAGLRLLREREMRNLRGDGKGVRKLSDRIYDFSTYNDLGNPDKGIDLTRPTLGGSEKYPYPRRCRTGRAPSDTDMHAESRVEKPLPMYVPRDEHFEESKQNTFTVMRLKAVLHNLIPGLKANLSANNQDFNEFSDVDGLYSEGLLIKFGLQDDVLKKLPLPKFVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGINPVNIEKLQVFPPVSKLDPEVYGPLESALKEEHILGQLNGMTIQQAIDENKLFIIDYHDIYLPFLDGINALDGRKSYATRTIFFLTPLGTLKPIAIELSLPPAGPSSRSKRVLTPPVDATTTWMWQLAKAHVCSNDAGAHQLVNHWLRTHACMEPFILSAHRQLSAMHPIFKLLDPHMRYTLEINALARQGLINADGIIESCFTPGRYCMEISSAAYKNFWRFDMEGLPADLIRRGIAVPDPTQPYGLKLLIEDYPYATDGLMIWSAIEDWVRTYVNHYYPNSSLICDDKELQAWYSESINVGHADLRHESWWPTLNSSDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEESDPEYAIFLADPQKYFLNSLPSLLQATKFMAVVDTLSTHSPDEEYLGERNQPSTWSGDPEIVEAFYGFSAEIRQIEKEIDNRNCDRTLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0550 920 PRINTS Lipoxygenase signature 594 614 IPR013819 GO:0016702|GO:0046872
Glsi07g0550 920 PRINTS Lipoxygenase signature 556 573 IPR013819 GO:0016702|GO:0046872
Glsi07g0550 920 PRINTS Lipoxygenase signature 574 591 IPR013819 GO:0016702|GO:0046872
Glsi07g0550 920 PANTHER LIPOXYGENASE 85 919 IPR000907 GO:0016702|GO:0034440|GO:0046872
Glsi07g0550 920 ProSiteProfiles PLAT domain profile. 99 221 IPR001024 GO:0005515
Glsi07g0550 920 Pfam PLAT/LH2 domain 137 220 IPR001024 GO:0005515
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 511 535 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 357 378 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 289 308 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 191 209 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 256 272 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 444 463 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 217 238 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 405 421 IPR001246 GO:0016491
Glsi07g0550 920 PRINTS Plant lipoxygenase signature 832 846 IPR001246 GO:0016491
Glsi07g0550 920 ProSitePatterns Lipoxygenases iron-binding region signature 1. 574 588 IPR020833 GO:0016702|GO:0046872
Glsi07g0550 920 FunFam Lipoxygenase 553 919 - -
Glsi07g0550 920 MobiDBLite consensus disorder prediction 276 307 - -
Glsi07g0550 920 Pfam Lipoxygenase 234 903 IPR013819 GO:0016702|GO:0046872
Glsi07g0550 920 Gene3D - 329 417 IPR027433 -
Glsi07g0550 920 FunFam Lipoxygenase 64 225 - -
Glsi07g0550 920 CDD PLAT_LH2 83 222 IPR042057 -
Glsi07g0550 920 FunFam Lipoxygenase 226 328 - -
Glsi07g0550 920 FunFam Lipoxygenase 419 551 - -
Glsi07g0550 920 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 224 920 IPR013819 GO:0016702|GO:0046872
Glsi07g0550 920 FunFam Lipoxygenase 329 418 - -
Glsi07g0550 920 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 83 225 IPR036392 GO:0005515
Glsi07g0550 920 ProSitePatterns Lipoxygenases iron-binding region signature 2. 601 611 IPR020834 GO:0016702|GO:0046872
Glsi07g0550 920 SUPERFAMILY Lipoxigenase 226 919 IPR036226 -
Glsi07g0550 920 SMART LH2_4 83 222 IPR001024 GO:0005515
Glsi07g0550 920 Gene3D - 226 328 - -
Glsi07g0550 920 Gene3D - 553 919 - -
Glsi07g0550 920 MobiDBLite consensus disorder prediction 291 307 - -
Glsi07g0550 920 Gene3D PLAT/LH2 domain 61 225 - -
Glsi07g0550 920 Gene3D - 418 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0550 Glsi-ChrGlsi07 4879875 4884758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0550 1 919 Acyl Lipid Metabolism Gene Families AT1G17420 73.498 0.0 1427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0550 07 4879875 4884758 Glsi07g0550 07 4879875 4884758 ECH