Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0527 ATGGCCACCGAGTCACCGAGTTCCGTTCGTAAAGTGGTTGTTCATTTGAGAGCCACTGGTGATGCTCCTATACTCAAGCAAGCAAAATTTAAGATACCAGGGACTGATAAGTTCGCTAAAGTGATAGACTTTCTTCGGCGGCAGCTCCACAGGGAAACATTGTTTGTATACGTCAATAGTGCTTTTTCGCCAAACCCTGATGAATTGGTCATTGATTTGTATAATAATTTTGGTTTTGATGGCAAACTAGTGGTCAACTACGCATGTTCCATGGCATGGGGCTAA 285 0.4316 MATESPSSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0527 94 SUPERFAMILY Ubiquitin-like 10 93 IPR029071 -
Glsi07g0527 94 CDD Ubl_ATG12 11 93 - -
Glsi07g0527 94 Pfam Ubiquitin-like autophagy protein Apg12 11 94 IPR007242 GO:0000045|GO:0005737
Glsi07g0527 94 Gene3D - 5 94 - -
Glsi07g0527 94 PANTHER AUTOPHAGY PROTEIN 12 3 94 IPR007242 GO:0000045|GO:0005737
Glsi07g0527 94 FunFam Ubiquitin-like protein ATG12 5 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0527 Glsi-ChrGlsi07 4674468 4677939 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0527 07 4674468 4677939 Glsi07g0527 07 4674468 4677939 ECH