Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0518 ATGGAAACAGTGGTTGGAATTGAGGATAATGAGGACGGGAAGCTTGAAGACAGTGGGATTGACAGAAGTAGCTCAGCTTGGTCTTCACCGAAGCAGATCGCCAACCCAGTTGTGTACAAGCTCGTTCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGAAGGTGGAGGATTTTCTTGAATACGACAAGAGTGAAATGCATGTTGTTGCTGACACTGGGCAGAACATTGAATGCATATCGATTCAAAGATCGTCCTCTGGGAAGCTTCAATTGGAGTGCTCAGAAGGTGTATCACAATCAGATATTGTTGGGGCAGATCTGATGAAGTTGAATGCACGACTTCAGATGTTGGAAAAGGTCAAACAGGAAGAGAAGCTTCATTTGACTTGTGGATCACCTGGTCTTTCTTATGTAAATATAGACAGCCAATGTTCTGCTGATAAATTGCCTGTCATGGGTGGGAAGATTCAATGTGAAATTCCCTCCAAGGAATCTGTTCCTTCTTTATCGCCGAGTTTAAACAATAGTCATAGCATTCAATCTGGAAGTATGGGTCAGTGTTCCAGACCTTCAGAAGGACTGATAGATAGTGGATCATCGGCTTCTTCTGTCTATTCTACTTTGAAGCCGGATTTTTCAATGTTAAAAGGAGAAATATGCTTGGACAAACTATCAATCAGAGAACTTCATGAACTGTTTAAAGTGACTTTTGGTCGGGAAACTACTGTAAAAGACAAGCAGTGGCTGAAGAGGAGGATTTCTATGAGTTTAACTAACTCATGCGATGTTTCAGCAACAACTTTTGTAGTTGAAGATAACAAATTAGTTAAAAAATTTGAGGAAGATAGTTGCGGTAATTTGAATACTGTACTCTCTAGCGATACTACAGTTGGAGGAGAGGCTATCAACTGTAAGGATTTATCAACTGCTGAGGGTAGTGGAATTGAGGATAATCAAGTTGTTTCTGTAAATATACTGAAAAATCATGATATGCAACATGAATTGGGAAGTGAGGATCTTCAGACAGAACAAAGATCTGCCAAAAGAATTCGGAAGCCCACTAAGAGATATATTGAAGAGCTTTCCGAAAGTGAATCCAGAGACCACCACCCAAGTTTGTTAAATTCATATAAAAACATGGGACTTGCACATGTCTCTCCAAACTCCTGCACCAGGCTTGCTAGGAATGTTTTTTCAGAGGGGAGAACAGTTATTACTAGGTTGGACTCTCTTGGAGGTTCTGGAATTCACATTCCATGTGTTTCTCGGGTTCGAAGAAGTCGTCCTAGAAAAAACATCATGTCTCTTATGAAATTTCATCCAAGTGGCATGGGGAAGGCTGCAAAATTGGGTTACAAGGCCCTTGGAGAGCATGCTTCTCAGGCTGATAGTGAGAATCGAGACCAAGTATTGAAATCTATCTCTACATCTGGAAAGTTTCAGCAGCCATATGCTGCTGAACCTGGGAAAGATAAGCAGTGTCCAGTAATGGGCACAATTGAGCTACGGCAGGAATTGAGACCAAAAAAAGCAGAACCATTTAGGTATACTTCAGATGACAAAACAGTTACTGTTCCCACTCCTCAGGGTGGAATCAGGAGGAAACATCATCGAGCATGGACTCTTGTTGAAGTTATGAAATTGGTTGAAGGCGTATCTCACTGTGGAGCAGGAAGGTGGTCTGAGATCAAACGACTTGCCTTTTCTTCCTACACATATCGTACCTCTGTTGATCTTAAGGATAAGTGGAGGAACTTGATTAAAGCTAGCTTTGCACAGTCGCCTGCAGAAGAGGGGATAAATTTGCGGAAGCACGGTGCAGTTCCCATCCCTGAGACGATTTTAGTACGAGTAAGAGAGCTTGCAGAGATAAATTCTCAGGTTCCTCCAAATGTTAGCTCAAGCAAGCTAACCGGCAGTGCCAGGAGCATGCACGAAGATAGATCAGGGTACTTTTAG 1977 0.4224 METVVGIEDNEDGKLEDSGIDRSSSAWSSPKQIANPVVYKLVRVEGDGRLVPATDDEVMKVEDFLEYDKSEMHVVADTGQNIECISIQRSSSGKLQLECSEGVSQSDIVGADLMKLNARLQMLEKVKQEEKLHLTCGSPGLSYVNIDSQCSADKLPVMGGKIQCEIPSKESVPSLSPSLNNSHSIQSGSMGQCSRPSEGLIDSGSSASSVYSTLKPDFSMLKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRISMSLTNSCDVSATTFVVEDNKLVKKFEEDSCGNLNTVLSSDTTVGGEAINCKDLSTAEGSGIEDNQVVSVNILKNHDMQHELGSEDLQTEQRSAKRIRKPTKRYIEELSESESRDHHPSLLNSYKNMGLAHVSPNSCTRLARNVFSEGRTVITRLDSLGGSGIHIPCVSRVRRSRPRKNIMSLMKFHPSGMGKAAKLGYKALGEHASQADSENRDQVLKSISTSGKFQQPYAAEPGKDKQCPVMGTIELRQELRPKKAEPFRYTSDDKTVTVPTPQGGIRRKHHRAWTLVEVMKLVEGVSHCGAGRWSEIKRLAFSSYTYRTSVDLKDKWRNLIKASFAQSPAEEGINLRKHGAVPIPETILVRVRELAEINSQVPPNVSSSKLTGSARSMHEDRSGYF 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0518 658 ProSiteProfiles Myb-like domain profile. 546 593 IPR001005 -
Glsi07g0518 658 Coils Coil 113 133 - -
Glsi07g0518 658 MobiDBLite consensus disorder prediction 635 658 - -
Glsi07g0518 658 MobiDBLite consensus disorder prediction 1 27 - -
Glsi07g0518 658 CDD SANT_TRF 544 594 - -
Glsi07g0518 658 SMART sant 542 595 IPR001005 -
Glsi07g0518 658 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 199 210 IPR001969 GO:0004190|GO:0006508
Glsi07g0518 658 Gene3D - 535 640 - -
Glsi07g0518 658 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 538 597 IPR017930 -
Glsi07g0518 658 SUPERFAMILY Homeodomain-like 540 609 IPR009057 -
Glsi07g0518 658 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 655 - -
Glsi07g0518 658 Pfam Myb-like DNA-binding domain 545 592 IPR001005 -
Glsi07g0518 658 MobiDBLite consensus disorder prediction 169 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0518 Glsi-ChrGlsi07 4593798 4607578 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0518 07 4593798 4607578 Glsi07g0518 07 4593798 4607578 ECH