Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0390 ATGCCAGGAATAAGGAAACTTTGTTCTTGGCCCAGCAAAATGCAAATCTCCATCCACAGTAAACTTTGTGCATCAGTTGTCTCTCTCTTCTTTCTGCATACAGCTCTATCTGGTTCGGGAGAGTCCAACACTAACGGAATCGATGCGTCGGTGGGTGGCTTGGTTTGGGTCCGCCGCCGAAATGGGTCGTGGTGGCCTGGCCGGATAATGGGTCTCCATGAATTGTCTGAGAGTTGCTTGGTTTCGCCGAGATCGGGCACTCCTGTTAAGCTGCTAGGTCGCGAGGACGCAAGTGTGGATTGGTATAATCTTGAAAAATCAAAGCGTGTTAAAGCTTTTCGTTGTGGAGAGTATGATGAATGCATTGAAAAGGCAAAGGCTTCTGCTGCCAATTCAAATAAGAAAACAGTGAAGTATGCTCGTAGGGAAGATGCTATTCTCCATGCTCTTGAGATAGAGGGTGCTCGCCTGGGCCAAGAACCATTAAATTTTTGCTCCAGAACAGATAAATCAGGTGGTGAACATGGTGTTTCAGCTGAAGAATCACCATCCCTGTCTCATTCTGATGAGGAGGAGGAGGAGGATGCGACTGGTGATCTGAGTGACTCTGAAGACAATTCTAATTCAGGTCCGGAATTATCTCAATCTGGTATATCTTTTGAAGAGCCAAATCACAATGGTTCCTCCAAGATGCAATCTGGGCATGGAAGAAGAAGAACCCCTAATGATTCAGAAGATGATGGAACAGAAGGAGTCAAGCGAATGAGAGGTCTTGAGGACCTTGGTATTGGTGTAGTGTCAAAGAGAAAGGTCCAGGGAGCAGGGACAACTGTGGTAGCTCAGCAAGATAGTACTTCACCTGGCAACTTAAACACTGGAAACTGCCTAGCAAATGGAACTTCTGTAAATGGTGTTAAGGGTAATTGCTCAACACTGAAAAGAAAGAGATCACAAGTGCCAAATGTTCACGAATTCTTGAAAAGGAAAAATCGACGCCGACCTTTGACAAAGGTTTTGGAGAGTACAGCCATGGTGTCAGTTCCCGTCATTTGTAATGAGCTTCCTAGTTCTAGCAGTTCTCCACTTTGTGGGATATCTGATGGTAGGATTTCAGCATTAGATTCCAAAGAGTCAAAGAAAACTTTTTCACTGGTAATTCACAATTCAGATAGTACTGGAGTTGAATGTGAGAATGGGAATGCTTCAAATGTTCATGAACATGGTTGTGATGCTTCCCAAATCAGTCTCAGGGTCAAGGAGAATGAGGCTTCTGGCATATCGGGGCTGGTTGGGAATGATTCCTCTGATAAATTATTTGATGTGCCATTTGTTGGGGTACTAGAGGAGGAGAAACACACTTCAGGTTTATCGCCCTTGATGGTTTCTTGTTCATCTGGAAATCCTCAAGTTGGTGGGTTTGGACAGCAATCTTGTCATGGTAGTCAATCTGAAGCTCTGTCATTGCAAAATGAGGGCCAGAATGAATCTGGTTCTACCAGTTCAGCTGCTGATCATAATAATATTGACCCTAGAGTAGAGAAAGGTAGTTCAAAGTGGCAGTCAAAAGGAAAGAGGAATTCAAGACATATAAGTAAAATAAGAGAACAAGTCTCAAGAAAAAATGTGGACATTGATGATGAATCCAGTGCTTATTTGGCAGGTATAGAGAACACAGATGGATTCTCCCGGGGTACTGGTCTGAAAGTTGATTGGAATGTCTTTGGTGCACCCACTGCTTCATACAATTGTACCTCTCAGGCTAGGTGCAAACCTGTTGCTGAAGGCCATCTTGATGGATTACAAGACTTGAGCAAGCATATCAGGGGAACAACAACAGGGGTGAAGCTATTGCCCGATGGACCTCTCATGCCTCAAAGATCACTTCCTTATCGCCAGTCCCGCTTTACTGTTAATTCCAGATATCAAATGGTGGATTTTCCTGGAAGAAATTATTGTTCTAATGCTTCATTATATGATGTTAAGCTTGAAGTTAAAGCCAGCTACCGGCCACAACATGTCCCTTTGGTTTCTCTTATGAGTAAACTGAATGGAAAAGCCATTGTTGGACACCCTCTTACGGTTGAGACTTTGGATGATGGTCATTGTGATGAAGTGTTGAGTGGCATTGTAAGTGACTTCGAAGTCGGTGACATCTATTGTGCTGTTAAGCCAAACTCGGTAGCTGGAAGAATACCTTCAAAGAACACTTCACGTTTTTCACCTAGTAAATCTTCCAAAATGAAGAAATCTGGGTTGTTGTCTAATAAAAAGATCAGGAAATTGTCATCACTGACTGGTCACAGGCAATCAGAAGAGGATAGAAAACCAGTGGTGGATAAGCCCAAGGGTCCTGTTATAGCGTGTATTCCCCTTAAAGTAGTATTCAGTAGGATAAATGAGGCAGTGAATGGTCAGGCACGGGCCACACACCGTGCATTACCCACATCCAACATTTGA 2457 0.4359 MPGIRKLCSWPSKMQISIHSKLCASVVSLFFLHTALSGSGESNTNGIDASVGGLVWVRRRNGSWWPGRIMGLHELSESCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAANSNKKTVKYARREDAILHALEIEGARLGQEPLNFCSRTDKSGGEHGVSAEESPSLSHSDEEEEEDATGDLSDSEDNSNSGPELSQSGISFEEPNHNGSSKMQSGHGRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVSKRKVQGAGTTVVAQQDSTSPGNLNTGNCLANGTSVNGVKGNCSTLKRKRSQVPNVHEFLKRKNRRRPLTKVLESTAMVSVPVICNELPSSSSSPLCGISDGRISALDSKESKKTFSLVIHNSDSTGVECENGNASNVHEHGCDASQISLRVKENEASGISGLVGNDSSDKLFDVPFVGVLEEEKHTSGLSPLMVSCSSGNPQVGGFGQQSCHGSQSEALSLQNEGQNESGSTSSAADHNNIDPRVEKGSSKWQSKGKRNSRHISKIREQVSRKNVDIDDESSAYLAGIENTDGFSRGTGLKVDWNVFGAPTASYNCTSQARCKPVAEGHLDGLQDLSKHIRGTTTGVKLLPDGPLMPQRSLPYRQSRFTVNSRYQMVDFPGRNYCSNASLYDVKLEVKASYRPQHVPLVSLMSKLNGKAIVGHPLTVETLDDGHCDEVLSGIVSDFEVGDIYCAVKPNSVAGRIPSKNTSRFSPSKSSKMKKSGLLSNKKIRKLSSLTGHRQSEEDRKPVVDKPKGPVIACIPLKVVFSRINEAVNGQARATHRALPTSNI 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0390 818 MobiDBLite consensus disorder prediction 472 506 - -
Glsi07g0390 818 MobiDBLite consensus disorder prediction 163 256 - -
Glsi07g0390 818 MobiDBLite consensus disorder prediction 236 256 - -
Glsi07g0390 818 Pfam PWWP domain 53 140 IPR000313 -
Glsi07g0390 818 ProSiteProfiles PWWP domain profile. 51 106 IPR000313 -
Glsi07g0390 818 Gene3D - 39 154 - -
Glsi07g0390 818 MobiDBLite consensus disorder prediction 731 752 - -
Glsi07g0390 818 PANTHER T17B22.17 PROTEIN-RELATED 38 816 IPR044679 -
Glsi07g0390 818 MobiDBLite consensus disorder prediction 186 201 - -
Glsi07g0390 818 MobiDBLite consensus disorder prediction 202 235 - -
Glsi07g0390 818 CDD PWWP 52 143 - -
Glsi07g0390 818 MobiDBLite consensus disorder prediction 472 534 - -
Glsi07g0390 818 MobiDBLite consensus disorder prediction 731 749 - -
Glsi07g0390 818 SUPERFAMILY Tudor/PWWP/MBT 49 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0390 Glsi-ChrGlsi07 2731000 2742671 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0390 07 2731000 2742671 Glsi07g0390 07 2731000 2742671 ECH