Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0366 ATGAGAGTCCTCAGAACAATCTTCACCGGCAAGCACCCCCTGCTTAACCCCACCAATCCCAGACGCTTTTCAGCTCCTTCTCTTATTTGCTTTCGTTTCCTTCCTAACCCTCAGTTTCCCCGTCATTTCCAGTCTGCAAGCAGTCAGCAAGAAGAACCGCAGACCAGTTTAAATACTTCTTCCGAGGGTAGAAGAAATCGTCACCCTTGGACATACCACGGTCATGTCTCTCCCCGGCCCGTTCCGCAGCGTGTTAAAGATAACAGTGATAGGCAAGACTTTGAACGGGACGCTGCTGGCGAAAGGCACACCAATCGGTTCGAGACTGAGGATAAAGTTGAAGACTTTAGAAAAAAAAGGGCATATGGGAGAGTGAACGGGGAGTACCCACTTAAGGGTACCGAACAGGGTGGGGGTCTTCGAAGCAGAGCTGGGAGCATTAAAAAGGGAAAGGGAAAAACCCATTGGGTTTGCTCAAATTGTGGGTATACATCTGGGCAATGGTGGGGGATTTGCCGCTCGTGTAGTATACCTGGCACAATGAAAGAGTTTCATGAAGCGAAATCCAATGATTCTGATAGGGTAAGTGGGTTTTCAGTTTCAGAGAATGCAGTGGGGTCGTGGCTCCCCCAGCAGGCCGGTGAATTGCGTCCGTTGAGATTGACGGATGTGAACCGGGGTCTCAATTATCAAGAGTGGAGAATTCCTTTCACCGGTTCTTTTGGAAATGAAGTTTCTAGAGTGCTTGGGGGCGGTCTTGTACCAGGCTCTTTGACTTTAGTTGGTGGTGATCCTGGTGTTGGGAAGAGTACACTTTTGTTGCAGATTGCTGCAATGATAGCAGAAGGGTGCGAGGGTGGTGAAGCTGCTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTCGGATTGAATCAGAACTATATTTATATTCAAGTACTGATATTGAGGACATATTGGAGAAAGTTCAACATCTCTCCCCTCGAGCTCTAGTCATTGATTCGATACAAACTGTGTATTTGAAAGGAGTAGTTGGAAGTGCTGGAGGGATTGCACAGGTGAAAGAATGTACTGCAGCATTGCTGCGATATGCAAAGAAGACCAACATTCCAGTTCTTTTGATTGGTCATGTGACGAAATCTGGAGATATTGCAGGACCCCGTGTCTTGGAGCACATTGTTGACGTTGTTTTGTATATGGAAGGTGAGAAGAGCTCTTCCCATCGTATGCTTCGAGTGGTGAAAAACCGGTTTGGATCGACTGATGAGCTTGGAGTGTTTGAGATGTCCCAATCAGGTCTTCAGGCAGTTTCAAATGCTAGTCAAATTTTTTTAAGTGAACAACACTTAGATTCAGAGTTTTTAGCTGGGGTAGCTGTTGCTGTCATAATGGATGGGTCTCGAGCTTTCCTAATTGAAATTCAGGCACTCTGTGTTTCTGATCCAACAGTTCCAACGCATTTTAATGGGATCGAAATAAGTAGAGCTTCTATGATTATATCTGTTCTCACGAAGCAAGCTGGTCTTCGTCTCCAAGGAAATGCTGTGTTTCTGAATGTTGTTAGTGGATTGACACTGACTGAAACTGCTGGAGATCTTGCAATAGCAGCTGCTATTTGCAGCAGTTTGTTGGAGTTCCCTATTCCCAATGACATTGCATTCATTGGTGAAATTGGCCTTAGTGGCGAGCTTCGCATGGTTCCTAGAATAGAGAAAAGGGTGAACACTCTGGCGAAATTAGGTTACAGAATTTGTATTGTACCGAAGGGAGCTGAAAAAGCTATAGGACTTGAAAATTTAGAAAACATGAAAATTGTAGGTTGCAGGAATCTGAAAGAGGTTATTAACAGTGTCTTCACAACACAATGA 1896 0.4504 MRVLRTIFTGKHPLLNPTNPRRFSAPSLICFRFLPNPQFPRHFQSASSQQEEPQTSLNTSSEGRRNRHPWTYHGHVSPRPVPQRVKDNSDRQDFERDAAGERHTNRFETEDKVEDFRKKRAYGRVNGEYPLKGTEQGGGLRSRAGSIKKGKGKTHWVCSNCGYTSGQWWGICRSCSIPGTMKEFHEAKSNDSDRVSGFSVSENAVGSWLPQQAGELRPLRLTDVNRGLNYQEWRIPFTGSFGNEVSRVLGGGLVPGSLTLVGGDPGVGKSTLLLQIAAMIAEGCEGGEAAPVVYVSGEESVEQIGNRADRLRIESELYLYSSTDIEDILEKVQHLSPRALVIDSIQTVYLKGVVGSAGGIAQVKECTAALLRYAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKSSSHRMLRVVKNRFGSTDELGVFEMSQSGLQAVSNASQIFLSEQHLDSEFLAGVAVAVIMDGSRAFLIEIQALCVSDPTVPTHFNGIEISRASMIISVLTKQAGLRLQGNAVFLNVVSGLTLTETAGDLAIAAAICSSLLEFPIPNDIAFIGEIGLSGELRMVPRIEKRVNTLAKLGYRICIVPKGAEKAIGLENLENMKIVGCRNLKEVINSVFTTQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0366 631 Gene3D - 466 631 IPR014721 -
Glsi07g0366 631 PRINTS DNA repair protein radA signature 417 443 - -
Glsi07g0366 631 PRINTS DNA repair protein radA signature 343 367 - -
Glsi07g0366 631 PRINTS DNA repair protein radA signature 247 275 - -
Glsi07g0366 631 PRINTS DNA repair protein radA signature 382 410 - -
Glsi07g0366 631 PRINTS DNA repair protein radA signature 158 182 - -
Glsi07g0366 631 PRINTS DNA repair protein radA signature 492 515 - -
Glsi07g0366 631 ProSiteProfiles RecA family profile 1. 234 387 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Glsi07g0366 631 PANTHER DNA REPAIR PROTEIN RADA 69 629 - -
Glsi07g0366 631 MobiDBLite consensus disorder prediction 41 111 - -
Glsi07g0366 631 Pfam Subunit ChlI of Mg-chelatase 514 598 - -
Glsi07g0366 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 438 IPR027417 -
Glsi07g0366 631 SMART AAA_5 255 413 IPR003593 GO:0016887
Glsi07g0366 631 MobiDBLite consensus disorder prediction 128 147 - -
Glsi07g0366 631 Pfam AAA domain 248 391 - -
Glsi07g0366 631 Pfam Rubredoxin metal binding domain 156 183 IPR041166 -
Glsi07g0366 631 SUPERFAMILY Ribosomal protein S5 domain 2-like 424 628 IPR020568 -
Glsi07g0366 631 MobiDBLite consensus disorder prediction 84 111 - -
Glsi07g0366 631 Gene3D - 244 444 IPR027417 -
Glsi07g0366 631 FunFam DNA repair protein radA isogeny 462 631 - -
Glsi07g0366 631 NCBIfam DNA repair protein RadA 151 623 IPR004504 GO:0003684|GO:0005524|GO:0006281
Glsi07g0366 631 MobiDBLite consensus disorder prediction 41 65 - -
Glsi07g0366 631 FunFam DNA repair protein RadA 243 445 - -
Glsi07g0366 631 CDD RadA_SMS_N 156 446 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0366 07 2474511 2482000 Glsi07g0366 07 2474511 2482000 ECH