Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0357 ATGGGGAGTTCTGGAGGATTGAGAGCTTCGTCGCAGCCTTCTCAAGCAGCGGCGAAACAGTATGGTGTGACGAAGCCGATATCAGTGGCCGGACCTACGATAGCTGATATACACAGGAATTTGGACTTAGAGAAGTTTCTAGTTCATTCTGGGCTTTATGAGAGCAAAGAGGAAGCTGCCAAGAGAGAAGAGGTCCTTCATCGACTTGGACAGATAGTAAAGAGTTGGGTGAAGCAGCTTACTCGTGTAAGAGGATACACAGATCAGATGGTGGAAGATGCAAATGCTATCATCTTAACCTTTGGTTCTTATCGACTTGGGGTTCATGGTCCTGGGTCTGACATAGACACATTATGTATTGGACCATCTTATGTGAACCGGGAGGAGGACTTCTTCTTTGTATTGCATGACATCCTAGCTAGCATGGAGGAAGTCACAGAACTGCAACCAGTTCCAGATGCTCATGTCCCAGTTATGAAATTCAAGTTTGATGGAATATCAATTGACCTACTATACGCAAGTATATCTTGCTTGGTTGTGCCAGAAGACTTGGACATATCCGATGTGTCTGTTCTACACAACGTGGATGAGCCTACTGTTCGAAGTCTGAATGGCTGTCGGGTTGCAGATCAAATTTTAAAGCTTGTTCCAAATGCTGAGCACTTTCGAACAACACTTCATTGCTTAAAATTTTGGGCCAAAAGACGCGGTGTTTATTCCAATGTGACTGGATTTCTTGGTGGTGTAAACTGGGCAATTCTTGTTGCTCGAGTGTGCCAATTGTATCCAAATGCTGTTCCAAGTATGCTTGTATCTCGATTCTTTAGGGTTTATACACAGTGGCGGTGGCCAAATCCTGTCATGTTATGTCCAATAGAGGAGAATGAGCTTGGATTTTCTGTTTGGGATCCTCGCAAAAATCCCCGTGACCGAACACATCATATGCCCATCATTACACCTGCCTATCCGTGCATGAATTCTAGTTACAATGTTTCAACAAGTACACTTCGTGTTATGATGGAGCAGCTTCAAAATGGCAACAAGATATGTGAGGAAATAGAACTGAATAATGCACATTGGAGAGCTATGTTTGAGTCATATCTTTTCTTTGAAAGCTATAAAAACTATTTGCAAGTTGACATAGTTGCTGCTGATGTTGATGACTTGCGAACTTGGAAGGGTTGGGTGGAATCACGACTTCGGCAACTGACTTTGATGATTGAGCGTGACACTCTTGGAAAGTTGCAGTGCCATCCCTATCCTCATGAGTATATGGATGCTGCAAAGCAATGTGCACATTGTGCTTTCTTCATGGGTTTGCGGAGGAAGCAAGGGGAGATTGTTCAAGAAGGTCAACAGTTTGATATACGAGAGACAGTTGATGAATTTCGGCATTCGGTTAATATGTACATGTTCTGGAAACCAGGGATGGACATATATGTTTCTCATGTTCGTAGAAGGCAAATTCCATCATATGTTCTTCCAAATGGTTATAGACGATCTCGACCATCAAAGCCAACAGCACAACCAGAGAATCCTGTTAAATCATTTCGTGTAGATGAGGTGCATGGAACTGAACATGTTGAGGGAAACCGTAAGAGGAAAAATGAGGACAGGATGGATGTAAAGAAGGGTGTTACTCAAAAAAGGCAATCTATTAGTCCTCTAAGGCAAGATTCGGTTTCTTCAGACATTATGAATAAATCAATGGATAGCTTGGGATGTAGTATAAAAAGCAAAATGTACCAGTTTGAAGTGACTCATGTTCGATGTTTGGCTTCCAATGGTTTGCCCGCTGATGCCATGTCTGATAGTCAAGAGTTGAACAACAGAGAGAGCATAAAATTGGCCTACAGAGGACAAGAGGATCTAGATAAAGGAATACCATCTCCTGAACCTGAACCTGAATGTGCATCAAATTCTAGTGTCGTTACATCTGTTACCAGTGATGGCAGTTCTTCAGACGATGTTGGATTTGGATCAGAGGCAGGCTGTGGTGAGGATAACATGGGGGGTGTCGAGGGGATGGTCAGAGAGGGTGATGAGATGGTGTCTTTTCAGGATACTGTGTATGGGAAAGATTCTGTTGTACTTTTGGAGAATGCAGTTGGAACTGGAAATGGATTATTACAAGACAAGCTACACAACAATTGGAGTCAAATGCTAAGCTAG 2172 0.4277 MGSSGGLRASSQPSQAAAKQYGVTKPISVAGPTIADIHRNLDLEKFLVHSGLYESKEEAAKREEVLHRLGQIVKSWVKQLTRVRGYTDQMVEDANAIILTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFFVLHDILASMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLHCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQLQNGNKICEEIELNNAHWRAMFESYLFFESYKNYLQVDIVAADVDDLRTWKGWVESRLRQLTLMIERDTLGKLQCHPYPHEYMDAAKQCAHCAFFMGLRRKQGEIVQEGQQFDIRETVDEFRHSVNMYMFWKPGMDIYVSHVRRRQIPSYVLPNGYRRSRPSKPTAQPENPVKSFRVDEVHGTEHVEGNRKRKNEDRMDVKKGVTQKRQSISPLRQDSVSSDIMNKSMDSLGCSIKSKMYQFEVTHVRCLASNGLPADAMSDSQELNNRESIKLAYRGQEDLDKGIPSPEPEPECASNSSVVTSVTSDGSSSDDVGFGSEAGCGEDNMGGVEGMVREGDEMVSFQDTVYGKDSVVLLENAVGTGNGLLQDKLHNNWSQMLS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0357 723 Gene3D - 22 364 - -
Glsi07g0357 723 MobiDBLite consensus disorder prediction 495 560 - -
Glsi07g0357 723 MobiDBLite consensus disorder prediction 623 656 - -
Glsi07g0357 723 Pfam Poly(A) polymerase central domain 22 365 IPR007012 GO:0043631|GO:1990817
Glsi07g0357 723 SUPERFAMILY Nucleotidyltransferase 19 215 IPR043519 -
Glsi07g0357 723 MobiDBLite consensus disorder prediction 635 656 - -
Glsi07g0357 723 SUPERFAMILY PAP/OAS1 substrate-binding domain 217 365 - -
Glsi07g0357 723 FunFam Poly(A) polymerase alpha, putative 54 210 - -
Glsi07g0357 723 FunFam Nuclear poly(A) polymerase 4 368 484 - -
Glsi07g0357 723 MobiDBLite consensus disorder prediction 516 546 - -
Glsi07g0357 723 FunFam Putative poly(A) polymerase gamma 193 364 - -
Glsi07g0357 723 Pfam Nucleotidyltransferase domain 96 171 IPR002934 GO:0016779
Glsi07g0357 723 Gene3D Beta Polymerase, domain 2 54 210 IPR043519 -
Glsi07g0357 723 CDD NT_PAP_TUTase 61 216 - -
Glsi07g0357 723 Gene3D Poly(A) polymerase predicted RNA binding domain 369 484 - -
Glsi07g0357 723 PANTHER POLY A POLYMERASE 11 540 - -
Glsi07g0357 723 Pfam Poly(A) polymerase predicted RNA binding domain 369 427 IPR007010 GO:0003723|GO:0043631
Glsi07g0357 723 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 369 494 IPR011068 GO:0003723|GO:0016779|GO:0031123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0357 Glsi-ChrGlsi07 2425790 2430903 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0357 07 2425790 2430903 Glsi07g0357 07 2425790 2430903 ECH