Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0325 ATGGACAGAGAAATACAAGCAACTTCATCATCATCATCATCATCAAGAGCAATGACCAGCAACAGTCTCCCACCACCAGAGGATGCTTGGCTTGATACTTGCCACAAGTTGTTGCCTCATTGGGAATCTCATTCCCTTTCTCAGCAGTCGATAATCCCCATTTCTATATCAAGAGTTAACCAAGTTGATGCAGCAAGACTGGATGTTGAGATGTCGGCCATGTTGAAGGAACAGTTGGTTAAAGTGTTCTCTTTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCTGAGCTTGATGCTTTCCTTGAGTTTCTCATTTGGCGATTCTCGATTTGGGTTGATAAACCAACTCCAGGCATTGCTCTCATGAACCTGAGATATAGAGATGAGCGTGCAATGGAACCCAGAGAAAAAGTCAGAACTGGTCTGGAGGGTCCTGGACTCACTGTTGCTCAGAAGATTTGGTACTGTGTTGCAACTGTTGGTGGCCAGTATATATGGGCTCGCTTACAGTCCTTCTCTGCTTTTCGTAGATGGGGTGATTCTGAGCAGAGGCCCTTGGCACGCCGCGTGTGGATCTTTATACAATGTATAGAAGGAATTTATAAAGCTGCTTCATTTGGCAACCTGTTGATATTTCTTTGTACTGGAAGATATAGAAATCTTATCGAAAGAGCTTTACGAGCTAGGCTTGTCTATGGGAGCCCAAATATGAATCGTGCTGTTAGCTTTGAGTATATGAACCGGCAGTTAGTTTGGAATGAATTCTCGGAAATGTTGTTGTTGCTTCTTCCTCTTCTTAACTCATCATCTATGAGAAATCTCCTTCGACCATTTTCTAAGGATAAATCTTCAAGTTCAACTGAGGATGACACTGTGTGCCCCATTTGTCGGTCTACTCCAATCATTCCTTTTGTAGCTCTCCCTTGTCAGCACAGATACTGTTACTACTGTCTTCGGACACGATGTACTGCTGTTCCATTGTTTAGATGTTCTAGGTGCAGCGAGCCAGTCACTGCTATGCAGCGGCATAGTGGCGTCACCAATGATTGA 1053 0.4359 MDREIQATSSSSSSSRAMTSNSLPPPEDAWLDTCHKLLPHWESHSLSQQSIIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEPREKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRPLARRVWIFIQCIEGIYKAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSMRNLLRPFSKDKSSSSTEDDTVCPICRSTPIIPFVALPCQHRYCYYCLRTRCTAVPLFRCSRCSEPVTAMQRHSGVTND 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0325 350 Pfam Zinc finger, C3HC4 type (RING finger) 294 334 IPR018957 GO:0046872
Glsi07g0325 350 PANTHER PEROXISOME BIOGENESIS FACTOR 2 19 348 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Glsi07g0325 350 MobiDBLite consensus disorder prediction 1 26 - -
Glsi07g0325 350 ProSitePatterns Zinc finger RING-type signature. 310 319 IPR017907 -
Glsi07g0325 350 MobiDBLite consensus disorder prediction 1 22 - -
Glsi07g0325 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 349 IPR013083 -
Glsi07g0325 350 Pfam Pex2 / Pex12 amino terminal region 68 272 IPR006845 -
Glsi07g0325 350 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Glsi07g0325 350 SUPERFAMILY RING/U-box 287 341 - -
Glsi07g0325 350 CDD RING-HC_PEX2 291 338 IPR045859 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0325 07 2162531 2166608 Glsi07g0325 07 2162531 2166608 ECH