Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0300 ATGGTTTGCAATGACGGAAGTAAATCCAACCCGAAATTCCCAGCCTTTCCTTTTAAACCTTACTCGATCCAGATCGATTTCATGAACGCCCTATATCAGTCTCTCAGCCAAGGTGGCGTTTCCATGCTCGAAAGTCCCACCGGTACTGGGAAGACTATGAGTGTCATTTGTAGCGCCCTGCAATGGGTGCTTGATCGGAGACGACAACAGGAATCAGGGGAAGCAGGACGGGAATGTGGTGAGAATCAGGCAAATCATGGTGGGCTTGGTTCAGATGATGAGCCTGATTGGATGAGAGACTTTGTTGTTAACAAAGAAAAGCAAGGCCAACCTGAAAGGAAAAGTAAGAAAAACGAGAAGTATGGGTCTCTATTAGGAAAACCTGATAAGAACAGGGAAAGTCGTAAAGATTTTCAGGCCGTGCATATTGAAGATTCTCCTTCTGAAAAGGGGTGTGAGAATTTGCATAAGAAAATCGATGAAGTGGATGTTATTGATAAGGAGTTTTTACTTGAAGAATATGAAAGTGAAGATGAAGAAACTCTGGGTAATGTGACGTCAAAGAGGAAGGCTACTAAAAGCGTTCTCGCCTCGTCCAGTGAAGAGGATGAGACTGATGATGAGGAGGATGCGGAGGAAAAGAATTTGAAGGTTTATTTCTGTAGTCGAACGCATTCACAGCTTTCTCAGTTCATAAAGGAATTACGGAAGACGGTCTTTGCTAATGAAATGAATGTTGTTTGTTTAGGCTCCAGGAAAAATCTTTGCATAAACGAAGAAGTACTAAAACTTGGAAACTCCACACGCGTAAATGAACGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAAGCCACAAAAATTAAGAACTTAAAAGCATGTGCAAGAGTACGGAGAACAAAGGCTTCGTTTGGTTGCCCAATGCTTGGAAAACATAGACAACAAAGAGAATTCAGGAGTGAGGTATCTCAGAGAGGGCCCTTGGATATTGAAGATCTTGCCAACCTGGGAAGAAATTTGGGAACTTGTCCATATTATGGCTCTAGAAGCATGGTTTTGAGAGCAGATCTTGTTGTCCTACCATATCAATCTCTTCTGTCAAAATCATCTCGTGAAGCACTTGGTCTAAATTTGAAATCTAATATTGTTATAATAGATGAGGCTCATAATTTAGCTGATTCACTCACCACAATGCATGACTCCAAAATTAGTCTATCACAGCTGGAAAATGTGCATTCCCATGTTGAGAGATACTTTGAGAAATTCTGTAATCTTTTGGGACCTAGTAATCGGAGATATATTCAAACTTTGATGGTCCTCACTCGAGCTTTCCTACGAGTGCTCCTTAATGAAAAGGATGCAAATCTCATAGATTCTTGCCAAGATACTGAAAAGGCTTTTGAAGAAAGTAGGGCCTCGGAATATACCATGGCCATCAATGATTTTATCTTTGAGCTAAATATAGACAATATCAACTTGGTCAAGTTGGTGAAGTATATGAAGGAAAGCAAAATCATGCACAAGGTTAGTAGTTACGGAGAAAAGGTAGCTAGCTTGGAGAAGATTTCAGTCCTCAATAAATTTGGGGAACATTGTGACGAGGGAGGCACTCAGTCTGCATTCCAGGCATTAGCTGACATATTGCTATCACTGATAAACAATGATAGTGATGGAAGGATAATCATTTCCAGGTCTAGAACAACGAGCTCCAGGAAACAAGGCGGATATATAAAATATGTTATGCTCAGTGGAGAGAAGATTTTCTCTGAGATTGTAGACCAGGCACACGCTGTTCTATTAGTAGGGGGAACACTGCAACCTATTGAAGAAACAAGAGAGCGACTTTTTCCATGGTTACCACCAAACCAGTTGCATTTCTTTTCATGTGGTCATATCATCCCTCCACAGAGCATAATGCCAATTGCAGTTTCTCGTGGCCCTTCCGGTCACTCCTTTAATTTTGGCTTCAGCTGCAGGAGCTCACCAGATACAATGCGGGAGCTAGGTCTTCTGCTCTGTAATTTGGCGACTGTGGTTCCTGAAGGAATTGTTGTTTTCTTTTCTTCTTTTGATTACGAAGGAAAAATTTATGAAGCATGGGAATCTTCTGGCATCCTAGAGAGAATTACAAATAGAAAGCGTGTATTTAGAGAGCCTAGAAATAATACAGATGTTGAATCTGTTCTCAAGGAATATAAAGAAACAGTCTGTACATTATCGAGTACAAATTCAAATGGAAACCAAGCATCTCATGGCGGTGCAATACTCCTTGCTGTTGTTGGTGGAAAGATATCCGAAGGGATCAACTTAAGTGATGGGATGGGACGATGCGTAGTCATGGTTGGACTGCCATACCCTAGTCCATCTGACATTGAGTTGTTAGAGAGGATAAAGCACATTGAAGGTCTTCGAAATTCAAACTCCATTGAAACTCCTAGATTTTCTTCCAGTTATAATGTTTACAGTGGAGATATAAAAGGTGGGTTTGACATCTTAAAAAGTTGCAGTCACAGAGGAAAAGAATACTATGAGAATCTCTGCATGAAGGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATTTTGTTGGTTGACACGAGGTATGCATCTGATTCCTCAAAAAGGAGTTTTTCCCACCCAGTCAACAAGCTCCCACAATGGATAAAAGATCGTCTTGTTTCATCTACCAACAACTATGGGGAAGTCCATAGGTTGCTGCATCAGTTTTTCAAATTCAACAAAAGGGGTCACGGCCAAAGAGGAACAACCTCAGATCACTGGACAAAATCTCAAAAGGTATGGGACCCTGAAGTACTTTGGCTCTCAGATCTGATAATTGTCATATTATCATATGGGCTATGGCCACCAGCTTTCATGTTTGATAGAGGGACAGAGAGTTTGAAAGGGACAGAGAGTATGGGATGCTGTGGAGAAAAAGCAGAATCACAAATGCTGCTAAGAGAAACCATTCACAAGACCAAGGTTTTCTTTCACAAAACCCTAAAAAATTTCAAGTCTTCCTTCTTTGGAGGGTACCAAAGATTACCCAGATCTCTTTCCTTCAATCCTTTCTCTTGCAGTAGTGGTAATGCAAGAACTTACACAAGAGACCAATTCTACAATGAGTTCTATGATCAGTTTCAGTCAGATCTAAACAGAATTAAGAAGGTTGATTATAATAGCTTATCTGGGAAAGAGCCGGCAACTGAAAATGCTTCATGTACTGGAAGTTTCATGACTTTCTCCAAGCAAGGTTCTCTAAAGAGCACTCCTGAAGACAGAGCAAAAAACAAGAACAAAGGGAGCTCTCAATTTGGGAAGAACGGAGATTTAAGGTCACAAAACATGAATGGGGGAGCTCATGTTTTGGCCCAAAAGATGAAGGAATTAGAGATGATGGATTCAGGTGACGTTGAGCAAGTAATAGACATAGAAGAGGCACTCCATTACTATTCTCGCCTCACAAGTCCGGTTTACTTACATATTGTGGACAAGTTTTTTGTGGACATGCACTCGGAGTTCTCTACTCCACAGTCCTCTGTCAGCATCAAACACTCAAAGGGAAGACTTGGCTGA 3597 0.4087 MVCNDGSKSNPKFPAFPFKPYSIQIDFMNALYQSLSQGGVSMLESPTGTGKTMSVICSALQWVLDRRRQQESGEAGRECGENQANHGGLGSDDEPDWMRDFVVNKEKQGQPERKSKKNEKYGSLLGKPDKNRESRKDFQAVHIEDSPSEKGCENLHKKIDEVDVIDKEFLLEEYESEDEETLGNVTSKRKATKSVLASSSEEDETDDEEDAEEKNLKVYFCSRTHSQLSQFIKELRKTVFANEMNVVCLGSRKNLCINEEVLKLGNSTRVNERCLELQKKKKNEATKIKNLKACARVRRTKASFGCPMLGKHRQQREFRSEVSQRGPLDIEDLANLGRNLGTCPYYGSRSMVLRADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLTTMHDSKISLSQLENVHSHVERYFEKFCNLLGPSNRRYIQTLMVLTRAFLRVLLNEKDANLIDSCQDTEKAFEESRASEYTMAINDFIFELNIDNINLVKLVKYMKESKIMHKVSSYGEKVASLEKISVLNKFGEHCDEGGTQSAFQALADILLSLINNDSDGRIIISRSRTTSSRKQGGYIKYVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIIPPQSIMPIAVSRGPSGHSFNFGFSCRSSPDTMRELGLLLCNLATVVPEGIVVFFSSFDYEGKIYEAWESSGILERITNRKRVFREPRNNTDVESVLKEYKETVCTLSSTNSNGNQASHGGAILLAVVGGKISEGINLSDGMGRCVVMVGLPYPSPSDIELLERIKHIEGLRNSNSIETPRFSSSYNVYSGDIKGGFDILKSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVNKLPQWIKDRLVSSTNNYGEVHRLLHQFFKFNKRGHGQRGTTSDHWTKSQKVWDPEVLWLSDLIIVILSYGLWPPAFMFDRGTESLKGTESMGCCGEKAESQMLLRETIHKTKVFFHKTLKNFKSSFFGGYQRLPRSLSFNPFSCSSGNARTYTRDQFYNEFYDQFQSDLNRIKKVDYNSLSGKEPATENASCTGSFMTFSKQGSLKSTPEDRAKNKNKGSSQFGKNGDLRSQNMNGGAHVLAQKMKELEMMDSGDVEQVIDIEEALHYYSRLTSPVYLHIVDKFFVDMHSEFSTPQSSVSIKHSKGRLG 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0300 1198 SMART deadxpd 12 431 IPR006554 GO:0003678|GO:0016818
Glsi07g0300 1198 NCBIfam DNA repair helicase (rad3) 152 906 IPR013020 GO:0003678
Glsi07g0300 1198 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 10 437 IPR014013 GO:0005524
Glsi07g0300 1198 SMART Cxpdneu3 690 877 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Glsi07g0300 1198 SMART ultradead3 16 470 IPR014001 -
Glsi07g0300 1198 MobiDBLite consensus disorder prediction 92 154 - -
Glsi07g0300 1198 Gene3D - 650 890 IPR027417 -
Glsi07g0300 1198 MobiDBLite consensus disorder prediction 1089 1123 - -
Glsi07g0300 1198 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 15 918 IPR045028 -
Glsi07g0300 1198 Gene3D - 192 445 IPR027417 -
Glsi07g0300 1198 Gene3D - 17 72 IPR027417 -
Glsi07g0300 1198 MobiDBLite consensus disorder prediction 68 154 - -
Glsi07g0300 1198 Pfam Helicase C-terminal domain 672 888 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Glsi07g0300 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 402 IPR027417 -
Glsi07g0300 1198 CDD SF2_C_XPD 637 875 - -
Glsi07g0300 1198 MobiDBLite consensus disorder prediction 176 210 - -
Glsi07g0300 1198 MobiDBLite consensus disorder prediction 1108 1123 - -
Glsi07g0300 1198 Pfam DEAD_2 220 408 IPR010614 GO:0003677|GO:0003678|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0300 Glsi-ChrGlsi07 2009951 2017638 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0300 07 2009951 2017638 Glsi07g0300 07 2009951 2017638 ECH