Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0240 ATGGGGAGAATGGGTTCCCAAACAGGTTGCCAGGTTCCTATTGTAGATTTCGCTCATGAGAACTTGCAGCCAGGTACAGACACATGGGTTTCAGCATGCCAAGTGATTCGTACTGCACTTGAGGACCATGGTTGTTTTTATGCACTGAGTAATAAGGTTCCTATGGAGCTTTACGACTCCGTGTTTACTCTAGTGCAAGAACTATTTGATCTTCCGTTGGAAACAAAAAGGCAAGAGACTAATGATAAGCCTAACCATGGTTACCAACAAACTTCTTGGTTCCCTTTATTTGAATCCATAGGAATCCATGACGCCGTGAACAAGGAAGCAGTTCAAAAATTCACCGAAATAATGTGGCCAGCAGGATATGATCATTTCTGTGAGACATTCAATCTCTATGCGAAGCTGCTAGAAGAATTAGACCATATTGCTAAAAGAATATTGTTTGACGCTTATGGTTTGGACAAAAGACACTATAATTCCCTGCTTGAATCAACCGATTACTTAATTCGGACTTTCAAATACAAAGTGCCCAAGAAGACAGAGAGCAATTTAGGAATGAAAGCTCACACAGACACTACATTCTTTACCATATTACAGCAGAATAATGTAACTGGCATGCAAGTTAAATTGAAAAATGGCGAATGGGTTGATACTGATCCCTCGCCCTCCATGTTTCTGTTCTTGGCAGGTGATGCATTTAAGGTTTGGAGTAACGACAGGATACAACATTGTGAACACCGAATCATCATAAGGGAAGAGAAGGAAAGATGCTCCGTGGGGTTATTTTCAGTTGGGAGTAACATAGTTCAACCACAAGAAGAGCTAGTTGATGAAGAGCATCCACTACGTTATAAACCATTTGACCAATACGAATACAAACGTTTCCATATATCAGAAGAGGCCTCAAAATATAAGTGTCGCATTAAAGCATACTGCGGCATAGACTATGCTGAAAATAATTAA 966 0.4017 MGRMGSQTGCQVPIVDFAHENLQPGTDTWVSACQVIRTALEDHGCFYALSNKVPMELYDSVFTLVQELFDLPLETKRQETNDKPNHGYQQTSWFPLFESIGIHDAVNKEAVQKFTEIMWPAGYDHFCETFNLYAKLLEELDHIAKRILFDAYGLDKRHYNSLLESTDYLIRTFKYKVPKKTESNLGMKAHTDTTFFTILQQNNVTGMQVKLKNGEWVDTDPSPSMFLFLAGDAFKVWSNDRIQHCEHRIIIREEKERCSVGLFSVGSNIVQPQEELVDEEHPLRYKPFDQYEYKRFHISEEASKYKCRIKAYCGIDYAENN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0240 321 Pfam 2OG-Fe(II) oxygenase superfamily 173 263 IPR044861 -
Glsi07g0240 321 Gene3D - 3 304 IPR027443 -
Glsi07g0240 321 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 90 IPR026992 -
Glsi07g0240 321 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 5 302 - -
Glsi07g0240 321 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 267 IPR005123 -
Glsi07g0240 321 SUPERFAMILY Clavaminate synthase-like 9 300 - -
Glsi07g0240 321 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0240 Glsi-ChrGlsi07 1563281 1565053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0240 6 293 Glycosyltransferase AT5G59530 24.342 1.73e-20 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0240 07 1563281 1565053 Glsi07g0240 07 1563281 1565053 ECH