Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0236 ATGGGTTCCCAAACGGTTTGCCAGGTTCCTATTGTAGATTTCACTGATGAGAATTTGCAGCCCGGAAGAGGCATATGGGTTTCAGCATGCCAAGTGATTCGGAGTGCTCTTGAGGACCATGGATGTTTCTATGCAATGAGTAATAAGGTTCCTATGGAGCTTTACGACTCTCTATTTACTGTAATGCAAGAAATATTTGATCTTCCGTTGGAAACAAAAAAGCAAGAGACTAGTAATAAGCCTTACCATGGTTACTACGGACGAAGTTATTGGTTCCCTTTATATGAATCCATAGGAATCGACGACCCCTTGAACAAGGAAGCAGTTCAAAAATTTACCAAAATCATGTGGCCAGCAGGATATGATCATTTCTGTGAGACTCTCCATCACTATGCAAAGCTACTGGTAGAATTGGATCATATGGCTAAAAGAATGGTGTTTGATGGTTACGATGTGGACATAAAACACTGTGATTCCCTGCTTGAATCAACCAATTACATGCTTCGAAGCTTTAAATACAGAATACCCCAGAAGACAGAGAGTAATTTAGGATTGCATGCTCACACAGACGCTTCGTTCTTTACCATATTGCATCAGAATAATGTAACCGGTTTGCAAGTCAAATTGAAAAATGGAGAATGGATTGATGCTGATCCCTCACCCTGCATGTTTCTTTTCCTGGCAGGTGATGCATTTAAGGTTCGGAGTAACGACAGGATAAGCCCTTGTGAACACCGAATCATCATAAGGGCAGAGAAGGAAAGGTGTTCCATGGGGTTATTTTCATTTGGGAGTAAGATGGTTGAAACACAAGAAGAACTCGTTGATGAAGAGCATCCACTACGTTATAAACCATTTGACCATTATGAATACATACGTTTCCATACATCAGAAAAGGGTTCAAGATCTGAGTGTCGCATCAAAGCATACTGCGGCATAGATTATGCTGATGATAATGAATGA 963 0.406 MGSQTVCQVPIVDFTDENLQPGRGIWVSACQVIRSALEDHGCFYAMSNKVPMELYDSLFTVMQEIFDLPLETKKQETSNKPYHGYYGRSYWFPLYESIGIDDPLNKEAVQKFTKIMWPAGYDHFCETLHHYAKLLVELDHMAKRMVFDGYDVDIKHCDSLLESTNYMLRSFKYRIPQKTESNLGLHAHTDASFFTILHQNNVTGLQVKLKNGEWIDADPSPCMFLFLAGDAFKVRSNDRISPCEHRIIIRAEKERCSMGLFSFGSKMVETQEELVDEEHPLRYKPFDHYEYIRFHTSEKGSRSECRIKAYCGIDYADDNE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0236 320 Pfam 2OG-Fe(II) oxygenase superfamily 173 262 IPR044861 -
Glsi07g0236 320 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 300 - -
Glsi07g0236 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 86 IPR026992 -
Glsi07g0236 320 Gene3D - 2 302 IPR027443 -
Glsi07g0236 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 292 - -
Glsi07g0236 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
Glsi07g0236 320 SUPERFAMILY Clavaminate synthase-like 5 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0236 Glsi-ChrGlsi07 1500178 1501369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0236 182 291 Glycosyltransferase AT5G59530 34.483 5.16e-15 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0236 07 1500178 1501369 Glsi07g0236 07 1500178 1501369 ECH