Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0216 ATGAGCAGGCCAGGAGACTGGAATTGCAGGTCATGCCAGCACCTGAACTTCCAGAGACGTGACTCTTGCCAGAGATGTGGGGATCCAAAATATGGAGATAGAATTGATTTTGGGGGGTTTGGAGGAAGAGTGGGATCTTCATTTGGGTTCAGTAGTAGTGGGTCAGATGTTCGCCCAGGTGACTGGTACTGTGCTGCTGGTAACTGTGGAGCACATAACTTCGCCAGCCGCTCCAGCTGCTTCAAATGTGGTGCTTTCAAGGATGACCTTACTGGATCCTATAACACTGACCTCTCTCGCTCAAGAGCTTTTGGTGCTGGGGGTGGTGGTGCCAGACCTGGTTGGAAATCTGGTGACTGGATATGCAACAGGTCAGGATGCAATGAGCACAATTTTGCTAGCAGAATGGAATGCTTTAAATGCAGTGCCCCAAGGGACACATACTAG 447 0.5011 MSRPGDWNCRSCQHLNFQRRDSCQRCGDPKYGDRIDFGGFGGRVGSSFGFSSSGSDVRPGDWYCAAGNCGAHNFASRSSCFKCGAFKDDLTGSYNTDLSRSRAFGAGGGGARPGWKSGDWICNRSGCNEHNFASRMECFKCSAPRDTY 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0216 148 ProSiteProfiles Zinc finger RanBP2 type profile. 58 89 IPR001876 -
Glsi07g0216 148 SMART zf_4 60 86 IPR001876 -
Glsi07g0216 148 SMART zf_4 118 144 IPR001876 -
Glsi07g0216 148 SMART zf_4 5 29 IPR001876 -
Glsi07g0216 148 PANTHER ZINC FINGER PROTEIN 55 146 - -
Glsi07g0216 148 FunFam Ran-binding zinc finger protein 108 147 - -
Glsi07g0216 148 SUPERFAMILY Ran binding protein zinc finger-like 50 88 IPR036443 -
Glsi07g0216 148 FunFam Ran-binding zinc finger protein 52 89 - -
Glsi07g0216 148 Pfam Zn-finger in Ran binding protein and others 116 145 IPR001876 -
Glsi07g0216 148 Pfam Zn-finger in Ran binding protein and others 3 31 IPR001876 -
Glsi07g0216 148 Pfam Zn-finger in Ran binding protein and others 58 85 IPR001876 -
Glsi07g0216 148 Gene3D - 112 147 - -
Glsi07g0216 148 Gene3D - 2 32 - -
Glsi07g0216 148 Gene3D - 50 89 - -
Glsi07g0216 148 ProSitePatterns Zinc finger RanBP2-type signature. 120 141 IPR001876 -
Glsi07g0216 148 ProSitePatterns Zinc finger RanBP2-type signature. 62 83 IPR001876 -
Glsi07g0216 148 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Glsi07g0216 148 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Glsi07g0216 148 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Glsi07g0216 148 SUPERFAMILY Ran binding protein zinc finger-like 109 146 IPR036443 -
Glsi07g0216 148 ProSiteProfiles Zinc finger RanBP2 type profile. 116 147 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0216 Glsi-ChrGlsi07 1384042 1384782 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0216 07 1384042 1384782 Glsi07g0216 07 1384042 1384782 ECH