Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0165 ATGGCCCCAAGATCAGGGAGAGGGAGATCGAATAAAGCCAAGGCAGACAAGAAGAAAAAGGAAGAGAAAGCCGCAGTGCCTTCTCTGGTTGACATAAATGTGGTCACTCCGTATGAATCACAAGTCGTCCTCAAGGGTATCTCTACCGATAAGATACTCGATGTAAGAAGGCTATTGGCTGTCAATGTGGAGACCTGCCATTTTACAAATTATTCTTTGTCCCACGAGGTTAAAGGGCAGAGTTTGAATGACAGAGTAGAAGTAGTTGCTCTGAAGCCATGTCTTCTAAAAATGGTTGAAGAGGATTACATAGAGGAAGACCAGGCAATTGCACAAGTGCGGCGAGTCTTGGACATCGTGGCCTGCACAACCAGGTTTGCGAAGCCCAGACGAGCCTTGACAAGCCCGGACTCCAAAGCCAAGAAGAACACTAAGGCCCAACATCATAATAAGCATAATCCGAGCCCGCCAACGACGCCCAATGGGGAAATCCGGGTCGCGTCCCCGTCATCGGAGCCGTCGGTGTCGCCGATCTCGGATAGCGTCGGCATGGTGGCCATTCATCCGACGCCGAAGCTTTCAGATTTCTACGAGTTCTTCTCTTTGTCTCACCTTTCTCCTCCGATTCTACATTTGAATAGATGTGAACTGAAGAATGGAGATGATAGGCGCAAAGAAGACTACTTTCAGCTTCAGATTAAAATCTGCAACGGGAAGCTGATAAAAGTGGTTGCATCAGAAAAAGGATTTTATACTGTTGGAAAGCAGTTACTTCAGAGCCATTCTTTAGTTGATCTTCTGAAACAGCTCAGCCGAGGTTTTGCTAACGCATATGGATCGCTGATGAAAGCTTTTGCCGAACACAATAAGTTTGGTAATCTCCCGTACGGATTCCGAGCTAATACATGGCTTGTCCCTCCTTCGGTTGCTGAGTGTCCTTTAAACTTTCCTGCCCTACCTAGTGAGGATGAAAACTGGGGTGGAAATGGCGGTGGCCAGGGAAGGTGTGGTGAATGCGATCTTAGACCATGGGCTACAGATTATGCAATATTGGCTTCCCTTCCTTGCAAAACTGAGGAGGAGAGAGTTGTCAGAGACAGAAAAGCTTTTCTGCTTCACAGTCAATTCGTTGACACCTCAATATTTAAGGCTGTTGCAGCTATACGGCATGTTATAGAGTCAAAGTCAAGTGAGAAGAACAAATTGAATTGTTCTCCAGGTTCAATCTTGCATGAAGAGCGTGTGGGGGACTTATCCATTGCCGTCAAACATGATATGATAGATGCGAATAAAATGTATGATACGGAACTTTCTTGCATTGAGTCCACACTGCCTAAGGAGGATGCTCAGAAGAATTTACTCAAAGGGTTGACTGCAGATGAAAGTGTAATTATTCATGATACTGCCTCCTTGGCTGTCGTTGTTGTACATTACTGTGGATACACTGCAACAGTAAGGGCGATAGGTAACATCAAGGGGAAGAAGCCTGAATTTCAAGATATCCAAATAGATGATCATCCCGATGGAGGAGCAAATGCTCTCAACGTCAACAGTTTGAGGATACTGCTTCACAAGTTTGGAGCTGAGCCATCAGAAGGGAGATCATCACTATCAAATTTGAATGATTTAGACTCATCTAGAAATCTAGTTCAGAAGGTGGTTAAAGAAAGCTTGGAAAAGATAAACGAGGAGCCAATTGTTTCAGAAAGGTCTATTCGGTGGGAACTTGGTTCTTTTTGGGTTCAGCATCTGCAAAAGCAAGAAACTTCAACAGATAAAAGTTCCAAAAACAGAGAAGATGGCAATGAAGTTGAACAAGCTGTCCAAGGTCTTGGAAAACAATTCAAATTTTTGAAGAGGAGGGAAAAGAAACCAAGTAGTCTTGATAGCACAGATTTTAGAGAGAAAAATGAATCTAGACCTGGAAGCTTGAATGTGGGAACTGATAATTTTGAGCCAAACAACGATGACTTAAGTAGCTCTACTGAATTAGAGAAACTACTTTCAGAAGAAGCATTTTTGCGTCTGAAAGAATCTGGAACTGGTCTTCATCTAAAGACAGTTGATGAGCTTATCAACATGGCACACAAGTACTATGATGAAACTGCCTTGCCAAAGCTGGTTACAGACTTTGGATCGCTTGAACTCTCTCCGGTTGATGGCCGTACATTAACTGACTTCATGCATTTAAGAGGATTAAAGATGCGCTCCTTGGGTGAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCCCTTTGTATTCATGAGATGGTTACTCGAGCTTTCAAGCATTTACTTAAAGCAGTTATCGCCTCTGTTGACAATGTAGCAGACTTATCTCCAGCCATTGCATCAACGCTGAATTTCTTACTTGGAAGCTGTCGGTTGGAAAATACTGACCAAAATTTAGGTGACAACAATCATCTCAGATTGCAGTGGTTACGAGTATATTTATCCAAAAGATTTGGATGGACATTGAATGATGAATTTCAACATTTGAGGAAGTTATCGATTCTTAGAGGGCTCTGTCATAAGGTTGGCTTGGAATTGTTCCCAAGAGATTATGACATGGAGACCCCCAACCCCTTCGGGAAATATGATATTATCAGCATGGTTCCTGTTTGCAAGTATGTAGGGTACACGCCAGCAGATGGACGCAATTTATTGGAATCATCCAAAATTGCTCTTGATAAAGGAAAGCTTGAAGATGCTGTAATTTATGGAACAAAGGCATTGGCAAAGATGATGGCCGTCTGTGGTCCCTATCATCGAACTACTGCTAGTGCTTACAGTCTTCTAGCTGTGGTTCTCTACCACACTGGAGATTTTAATCAGGCAACCATATATCAGCAGAAGGCCTTGGATATAAATGAGAGAGAGCTTGGGCTTGACCATCCAGACACAATGAAAAGCTATGGGGATCTTTCAGTCTTTTATTATCGTCTGCAACACATTGAGCTGGCTCTGAAGTATGTCAACCGTGCTCTATTCCTTCTTCACTTTACATGTGGACTGTCTCATCCAAACACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTTCACTTGGCGCTCAGATACTTACATGAAGCTCTTAAATGCAACAAAAAATTGTTAGGAGAAGATCATATACAGACTGCTGCAAGCTTTCATGCCATAGCCATAGCTCTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAGCAAACTACCCTCAAGATACTTAAAGAAAAGCTTGGATCAGAAGATCTTCGTACACAGGATGCTGCTGCATGGCTTGAATATTTTGAATCAAAAGCAATAGAGCAGCAAGAAGCGGCTAAAAATGGGATTCCAAAGCCAGATGCATCCATTGCAAGTAAAGGCCACCTTAGTGTGTCAGATCTCCTGGATTTTATAAGTCCTGAACATGAGTCAAAAAGAAATTATGCTCAGAGGAAACAGCGGCGTGCAAAGATAAACCCAATAACTGATCAAAACCATCAAGAACATGATGGTTTGATAGCTGCTGAGGACATTCTCTTTGATGGTTCAAAAGATGGTACAAGTATGGAAGAAGGCAACACTCAAGGAACGAATGGCACACTTCATTCTGAAGAGCTGAAAGAAAATGGTGGTTTCACTAGTTACAGGCCAGTGACGAGTGAAGTTGTTGAGGAAACTTCATCTGATGAAGGCTGGCAAGAAGCCAATCCAAAAGGGAGGTCAGGGAACACTGCTAACCATAAGTTTAATCGGAGACGACCTATTGTTGCAAAGCTGAAGATTAATAGTTCTGAGAATTTTGTCAGAGAGAACAGTTATAGGAATGACATTACTTCACCACTGCAAAAAGGAACTTCAAAAATCATGTCAACCATGTCATCTCCACCTGGACAATCAAAAGCTAGAAACTTAGCTTCAAAAAAAGAGGACCCTGTTAACCATCCAACAAAAGCTTCAGTGTCCAAAATTTCTTCTACTCCAGCAGCTCTAAGTTCTTTGGCTTCAAAGTCTATATCTTACAAAGAAGTGGCTCTGGCACCGCCTGGTACGGTTTTAAAGCCCTTGTTGGAGAAAGCTGAAGTGGACAGGGTAAAGGCTGAAGATGAGATGTGCAACAGTCCACCTGTGATATCAATAAATGAAGAAAGCTGCCAAAGCTCCATAGTTGAAGCGGTTTCCGAGCATGATAAAATGGAGGGAACTTGTGAAACTGATACTCAACAAGAAGATTCTGCATCAGAAATTGAGGAGGTTTCCCTCTTGGCAGAGCAGGCAAAACCTACAGACACAAATGGTACTAAGCTTTCAGCTGCAGCCAAACCGTTCAATCCAGGAATGCTGTGCATTCCTCATCATTTAAATTCAGTCGCTGTCACAAACATTTATGATGCAAATGCTAGTCAAGGCATGTTTGTGGAGCCTGTGCTTCCTCCTGTTGCTGCTAGGGTCCCTTGTGGGCCTAGATCACCTCTATATTATAGAACCAACTATACTTTTCGCATGAAACATGGTTATACAAAACATCAAACCCCTATCAGGGAAATAAGTGGATTTGGGGCTCCAAGAATCATGAACCCACATGCACCTGAGTTTTTTCCCAGAAAAGCTTCACAAATGGAAACTGGTGATGCCAATTCAGAAGTTTCCTGCGGGCTTAATACTTCATTTGAAACAAGTGTGGCAGAACACAATAAGCTGGATGAAAATTTCATCAAAAAAATCAAGGATAGTTCCAAAAGAAAGAGTATTTCTGAATCTGAGAAGTCAGAACTAGCAAGGCAGATATTGCTTAGTCTGCTTGTGAAATCAGTTCAGCAAAATATTGATTCTGCAGATGATTCTAAAGTAAGTGAAGAAAAGCACGAGAATTTGGAAAATTCTTCTGATGCAATAGCCAAAGACACTGCTATAATAAAAATTCTATACGGGAATGAAGAAAAGAAGATGGTTCCTCAATCCTGTGATAGTGAAGAGCAAGAAAAAGTAGATGTAACTAAGAAAAAGAATGGAGATAGTGAAGGATTTATGGTTGTCACAAAGAGGAGAAGAAGCAGGCAGAAGTTCACAAATGGAGTAACAAGATTGTACAACCAGCAGTCCATCTGTGCTTCAGTCCGTTGA 5136 0.4208 MAPRSGRGRSNKAKADKKKKEEKAAVPSLVDINVVTPYESQVVLKGISTDKILDVRRLLAVNVETCHFTNYSLSHEVKGQSLNDRVEVVALKPCLLKMVEEDYIEEDQAIAQVRRVLDIVACTTRFAKPRRALTSPDSKAKKNTKAQHHNKHNPSPPTTPNGEIRVASPSSEPSVSPISDSVGMVAIHPTPKLSDFYEFFSLSHLSPPILHLNRCELKNGDDRRKEDYFQLQIKICNGKLIKVVASEKGFYTVGKQLLQSHSLVDLLKQLSRGFANAYGSLMKAFAEHNKFGNLPYGFRANTWLVPPSVAECPLNFPALPSEDENWGGNGGGQGRCGECDLRPWATDYAILASLPCKTEEERVVRDRKAFLLHSQFVDTSIFKAVAAIRHVIESKSSEKNKLNCSPGSILHEERVGDLSIAVKHDMIDANKMYDTELSCIESTLPKEDAQKNLLKGLTADESVIIHDTASLAVVVVHYCGYTATVRAIGNIKGKKPEFQDIQIDDHPDGGANALNVNSLRILLHKFGAEPSEGRSSLSNLNDLDSSRNLVQKVVKESLEKINEEPIVSERSIRWELGSFWVQHLQKQETSTDKSSKNREDGNEVEQAVQGLGKQFKFLKRREKKPSSLDSTDFREKNESRPGSLNVGTDNFEPNNDDLSSSTELEKLLSEEAFLRLKESGTGLHLKTVDELINMAHKYYDETALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMRSLGEVVKLAENLPHIQSLCIHEMVTRAFKHLLKAVIASVDNVADLSPAIASTLNFLLGSCRLENTDQNLGDNNHLRLQWLRVYLSKRFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMETPNPFGKYDIISMVPVCKYVGYTPADGRNLLESSKIALDKGKLEDAVIYGTKALAKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHLALRYLHEALKCNKKLLGEDHIQTAASFHAIAIALSLMEAYSLSVQHEQTTLKILKEKLGSEDLRTQDAAAWLEYFESKAIEQQEAAKNGIPKPDASIASKGHLSVSDLLDFISPEHESKRNYAQRKQRRAKINPITDQNHQEHDGLIAAEDILFDGSKDGTSMEEGNTQGTNGTLHSEELKENGGFTSYRPVTSEVVEETSSDEGWQEANPKGRSGNTANHKFNRRRPIVAKLKINSSENFVRENSYRNDITSPLQKGTSKIMSTMSSPPGQSKARNLASKKEDPVNHPTKASVSKISSTPAALSSLASKSISYKEVALAPPGTVLKPLLEKAEVDRVKAEDEMCNSPPVISINEESCQSSIVEAVSEHDKMEGTCETDTQQEDSASEIEEVSLLAEQAKPTDTNGTKLSAAAKPFNPGMLCIPHHLNSVAVTNIYDANASQGMFVEPVLPPVAARVPCGPRSPLYYRTNYTFRMKHGYTKHQTPIREISGFGAPRIMNPHAPEFFPRKASQMETGDANSEVSCGLNTSFETSVAEHNKLDENFIKKIKDSSKRKSISESEKSELARQILLSLLVKSVQQNIDSADDSKVSEEKHENLENSSDAIAKDTAIIKILYGNEEKKMVPQSCDSEEQEKVDVTKKKNGDSEGFMVVTKRRRSRQKFTNGVTRLYNQQSICASVR 1711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 1229 1256 - -
Glsi07g0165 1711 Gene3D Tetratricopeptide repeat domain 890 1001 IPR011990 GO:0005515
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 1192 1209 - -
Glsi07g0165 1711 SMART tpr_5 971 1004 IPR019734 GO:0005515
Glsi07g0165 1711 SMART tpr_5 929 962 IPR019734 GO:0005515
Glsi07g0165 1711 SMART tpr_5 1013 1046 IPR019734 GO:0005515
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 586 606 - -
Glsi07g0165 1711 Gene3D Tetratricopeptide repeat domain 1003 1121 IPR011990 GO:0005515
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 1282 1306 - -
Glsi07g0165 1711 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 11 1618 IPR027523 GO:0006996
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 641 660 - -
Glsi07g0165 1711 ProSiteProfiles TPR repeat profile. 929 962 IPR019734 GO:0005515
Glsi07g0165 1711 Pfam Translation initiation factor eIF3 subunit 135 716 858 IPR033646 -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 1 22 - -
Glsi07g0165 1711 ProSiteProfiles Clueless (Clu) domain profile. 322 595 IPR025697 -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 150 177 - -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 1229 1249 - -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 619 660 - -
Glsi07g0165 1711 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 1189 1210 - -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 621 639 - -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 1282 1328 - -
Glsi07g0165 1711 CDD CLU-central 718 859 IPR033646 -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 130 177 - -
Glsi07g0165 1711 Pfam Tetratricopeptide repeat 928 998 - -
Glsi07g0165 1711 Pfam Tetratricopeptide repeat 1012 1087 - -
Glsi07g0165 1711 SUPERFAMILY TPR-like 889 1043 IPR011990 GO:0005515
Glsi07g0165 1711 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 884 1134 - -
Glsi07g0165 1711 MobiDBLite consensus disorder prediction 589 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0165 Glsi-ChrGlsi07 1088000 1098260 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0165 07 1088000 1098260 Glsi07g0165 07 1088000 1098260 ECH