Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g2072 ATGTCAGGTTTGTACAATCCCAACTTCTCACCTGCTAGAGCGGCTTCTCCACAGATTAGAAGCACCCCAGACGTCGATAGTCAATACTTGACGGAGTTGCTAGCAGAGCATCAGAAGCTCGGACCCTTCATTCAAGTCCTTCCGATATGCAGTCGGCTGTTAAATCAAGAGATATTGAGAGTTTCAGGAATGTTGTCGAACCAAGGCTTTGGTGACTTTGACAGACTGCGGCAAAGAAGTCCCAGCCCTATGACTTCTTCAAATCTCATGTCAAATGTCCCTGGAACAGGATTGGCTGGCTGGAATAGTCTTCCTCAGGAGAGATTATGTGGACCCACTGGAATGACAATGGACTGGCAAGGTGCACCTGCAAGTCCTAGTTCATACACTGTAAAGAGGATCTTGCGATTGGAAATTCCAGTAGATACATACCCCAATTTTAACTTTGTTGGAAGACTTCTCGGACCTAGAGGCAACTCTCTGAAACGGGTAGAAGTGACTACGGGCTGCCGTGTGTATATTAGAGGAAAAGGATCAATAAAGGATCCAGACAAGGAAGAGAAATTAAGAGGAAGACCAGGCTATGAGCATCTCAATGAACCACTGCACATTTTAATTGAGGCTGATTTGCCTGCAAATATTGTTGACTTAAGGCTCAGACAGGCCCAGGAAATTATAGAAGAATTGCTCAAACCTGTGGATGAGTCACAGGACTACATTAAGAGGCAGCAGTTGCGTGAATTAGCTATGCTGAATTCAAATTTCCGAGAAGAGAGTCCAGGGCCAAGTGGTAGTGTATCTCCATTCAATTCCAGTGGAATGAAACGTGCAAAAACAGGTCGCTGA 846 0.4515 MSGLYNPNFSPARAASPQIRSTPDVDSQYLTELLAEHQKLGPFIQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRQRSPSPMTSSNLMSNVPGTGLAGWNSLPQERLCGPTGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDLRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g2072 281 MobiDBLite consensus disorder prediction 1 21 - -
Glsi06g2072 281 MobiDBLite consensus disorder prediction 256 281 - -
Glsi06g2072 281 PANTHER RNA-BINDING PROTEIN RELATED 18 272 IPR045071 -
Glsi06g2072 281 Pfam Homodimerisation region of STAR domain protein 23 72 IPR032377 -
Glsi06g2072 281 Pfam KH domain 148 184 IPR004088 GO:0003723
Glsi06g2072 281 SMART kh_6 131 231 IPR004087 GO:0003676
Glsi06g2072 281 MobiDBLite consensus disorder prediction 255 281 - -
Glsi06g2072 281 Gene3D K Homology domain, type 1 19 262 IPR036612 GO:0003723
Glsi06g2072 281 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 138 256 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g2072 Glsi-ChrGlsi06 67920899 67925248 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g2072 06 67920899 67925248 Glsi07g2217 07 67311614 67316877 CCT
Glsi06g2072 06 67920899 67925248 Glsi06g2072 06 67920899 67925248 ECH