Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1834 ATGAGCCCATTTAGTAGGAAAGGCCCATCTGGGGATCATAGAGTCCTGGATGAAGGCCGGAAAGAGAGAAGAACAGAAGAAGAAGAGCGAAGACGAACCATGGTGAAGGACAGGAAAGTCGGGGTGGCTATGGACTTCTCTAAGAGCAGCAAGAACGCTCTCAAATGGGCGCTTGAGAATTTGGCTGATAAAGGCGATACCTTTTACATCATCCACATCAACCACAACACTCTTGTTGATGAGTCCCGCAATTTGCTGTGGGACAAATCTGGTTCTCCTCTTATTCCTTTGGCTGAGTTCAGAGAGCCGGAGATAATGAAGAAATACGAGATAGAAACTGATATTGAGGTTCTCGACGTGCTTGATACTGCTGGTAGACAGAAAGAGGTGGACATTGTTGCAAAAATATACTGGGGGGATGCGAGGGAGAAGCTTCTGGATGCTATTGAAGATCTGAAGCTGGACTCTCTGGTTATGGGAAGCAGAGGCCTCAGCACTATCAGAAGGATCATATTGGGAAGTGTCAGCAACTTTGTGATGACACATGCTCCTTGTCCTGTGACCATCGTCAAGGAGTCAAGCTGCTGCAATTAG 594 0.4697 MSPFSRKGPSGDHRVLDEGRKERRTEEEERRRTMVKDRKVGVAMDFSKSSKNALKWALENLADKGDTFYIIHINHNTLVDESRNLLWDKSGSPLIPLAEFREPEIMKKYEIETDIEVLDVLDTAGRQKEVDIVAKIYWGDAREKLLDAIEDLKLDSLVMGSRGLSTIRRIILGSVSNFVMTHAPCPVTIVKESSCCN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1834 197 CDD USP_Like 39 190 - -
Glsi06g1834 197 PRINTS Universal stress protein signature 151 163 IPR006015 -
Glsi06g1834 197 PRINTS Universal stress protein signature 37 55 IPR006015 -
Glsi06g1834 197 PRINTS Universal stress protein signature 169 191 IPR006015 -
Glsi06g1834 197 PANTHER IMP2'P 34 194 - -
Glsi06g1834 197 MobiDBLite consensus disorder prediction 10 34 - -
Glsi06g1834 197 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 38 192 - -
Glsi06g1834 197 FunFam Universal stress protein family protein 34 194 - -
Glsi06g1834 197 MobiDBLite consensus disorder prediction 1 34 - -
Glsi06g1834 197 Pfam Universal stress protein family 38 191 IPR006016 -
Glsi06g1834 197 Gene3D HUPs 25 195 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1834 Glsi-ChrGlsi06 65412651 65417115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1834 31 190 Receptor kinase-like Gene Family AT5G35380 26.220 4.91e-07 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1834 06 65412651 65417115 Glsi07g1906 07 62080648 62084556 CCT
Glsi06g1834 06 65412651 65417115 Glsi06g1834 06 65412651 65417115 ECH