Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1612 ATGGCCCAACGTTCTCATGTCCCAAAATTTGGCAATTGGGAAAGTGAAGAGAATGTTCCCTATACTGTTTTCTTTGACAAGGCCCGGAAAGATCGAACTGGCACGAAGATGATAAATCCAAATGATCCTGAGGAAAATTCAGATTTAGTTCTTGATAATTCATCTTCTGCTTACTTACCTACTTCAAAACCCAGAGTCGATTTGAAGGAGCAGGCTAGAAAGGGATCAGTGAGATCAACAATTGAGTCAGAGAAGAGCATGAAGAAAAGCGATCCTAATGATTTCATTGGTTCTCCAGCTCTTGGAGGTCATGGAGTAGGCTCCGCTGATAACCGTAGAAGACCTGCAAGACCAAGTGCTGGGTCTGAATACAGCTTTGAACGATCACCCCTTCATCGCCAGGCAAGGACCCCAAGCAGAGATAGTCACTCTTGGGAAGGAAAGAATTCATATGACAGCAGCCATGGTACACCAGGAAGATCCCGACTAAGACCTGTTAATCGAGCCGATGAAACTCCTGATCGAGGTGCTGCCGTTCCTAAGTTTGGTGAGTGGGATGAGGGTAACCCTGCATCAGCTGATGGCTATACACACATTTTCGATAAGGTGCGGGAGGAGAAACAGGGTGGAGGTGGACACGTGCCAGGCACACCTCCAAGGGGACCATATGTGGTCCGGAGCAAAGTCCCCAATGAAAAAGCCCAGTTTGGAGGTTTCACCAAACTGATGCTTCTTTTTGTACCCCTTCTGGCTTCTCCAGAGTTGCTGCTTTTGGTGGTACAAAAAATGATTTCTTGGAAATTGTGGATGAGATTCTAA 819 0.464 MAQRSHVPKFGNWESEENVPYTVFFDKARKDRTGTKMINPNDPEENSDLVLDNSSSAYLPTSKPRVDLKEQARKGSVRSTIESEKSMKKSDPNDFIGSPALGGHGVGSADNRRRPARPSAGSEYSFERSPLHRQARTPSRDSHSWEGKNSYDSSHGTPGRSRLRPVNRADETPDRGAAVPKFGEWDEGNPASADGYTHIFDKVREEKQGGGGHVPGTPPRGPYVVRSKVPNEKAQFGGFTKLMLLFVPLLASPELLLLVVQKMISWKLWMRF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1612 272 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 219 IPR040387 -
Glsi06g1612 272 MobiDBLite consensus disorder prediction 27 190 - -
Glsi06g1612 272 MobiDBLite consensus disorder prediction 129 148 - -
Glsi06g1612 272 MobiDBLite consensus disorder prediction 164 181 - -
Glsi06g1612 272 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 173 208 IPR008700 -
Glsi06g1612 272 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 33 IPR008700 -
Glsi06g1612 272 MobiDBLite consensus disorder prediction 39 61 - -
Glsi06g1612 272 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1612 Glsi-ChrGlsi06 61884960 61907523 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1612 06 61884960 61907523 Glsi07g1675 07 55458425 55469547 CCT