Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0718 ATGACACAACCCAAAACCCCATTACCTAAAAACATGGATTCCATACTGTCATTAGGTGAAGATGTTTGTTATGATGCTTCAACGTTTGGTTGCTTTTCTTCTCAATTGTTTTCTTCCTCGTTCAATGCTTCTGAGGCAGGTGTGAATTACTATTCAGTGGTTAATTTAATTGCAGCAAGTTCTCCTTTCCCCATTTGTTCTTATCTTTACTATAAACACGGAGACTCACTGAATCTCTTCGGACCCATTTTCGCAGTGACAGTGGGAGAGGCTTTAAATAAGGTATTTCCTTTCAACTCTTTTATGGCCGGAGAAACATCGTGGATCAGTCACTACCTTGATAATGCACCAAGGGAGAATAGGGAATTTGATTCATTCTTAGAACTTGGTGATGAAAGTGGTAGAGAAGTTACTGCTGTTTCTGTGGATGTGATTTTGCCTGATGACTTGTTGGAACGTATCCTAGCATATCTCCCCACTGCAAGCATTTTCAGAGCAGGTTGTGTTTGTAAAAGATGGCATGAGATTGTTACTTCAAAGAGGTTTCTATGGAACCTGTCACATGTGCTGTCACAGAAACCTTGGTACTTTATGTTTACAAGCTGTGATGGACCTAGTGGTTATGCTTATGACCTTACACTTCGGAAATGGTATGGCATTGAACTTCCCTGCATTAAGACTTCTAATTGGTTCATTTCTTCATCATGCGGCTTAGTTTGCTTCATGGACAATGACAGTAGAAGTAAATTATTCATGTGCAACCCTATTACTAAAGTCTACAGGGAACTTGAGGACCCGCCAGGTTTCAAATTTTCTGATTACAGTGCATTAGCAACTTCTGTGGACAAAATATCACAGAGTTATACTGTGGCAATTGTAAAATCAAAGCAAGTCCCTGAGAACTTTTTCCAGTGGGATATTTCAGTTCATATATACCATTCAGATACTAAGACCTGGGTGACCAGTTTAACAGAGGTTTTGATGGGGTGGAGAGGTGGTGATGAGAGTGTCATATGTAACGGGGTGCTGCACTTTTTAGTTTATTCAACTGGGGGTGTTCCGCCAGAAAATCGTCATGCCCTCATTGCATATAATATCTCTAACCGTTCTTCTCACTGTTCCTTGACAAGGAACTTTATTCCAATACCTTGTCCTCTAACATGTGGCCGTCTGATGAATCTGAAGGAAAAGCTTGTAATGGTGGGAGGAATTGGCAAACATGATCGGCCTGACATTATAAAAGGGATTGGTATCTGGATTCTAAATGATAAGAAGTGGAATGAGATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAGTTTGACGATGTTTTTGCTAGCAGTGGTACAGATGATCTAATATATATTCAAAGCTATGGATCTCCAGCGCTTCTCATATTTGACATGAACCATAAACAATGGAAATGGTCACAGAAGTGCCCAGTGACAAAAAGGTTCCCACTGCAGCTTTTCACTGGTTTTTGCTTTGAGCCCAGGCTTGAAATTGCTCCATAG 1521 0.4063 MTQPKTPLPKNMDSILSLGEDVCYDASTFGCFSSQLFSSSFNASEAGVNYYSVVNLIAASSPFPICSYLYYKHGDSLNLFGPIFAVTVGEALNKVFPFNSFMAGETSWISHYLDNAPRENREFDSFLELGDESGREVTAVSVDVILPDDLLERILAYLPTASIFRAGCVCKRWHEIVTSKRFLWNLSHVLSQKPWYFMFTSCDGPSGYAYDLTLRKWYGIELPCIKTSNWFISSSCGLVCFMDNDSRSKLFMCNPITKVYRELEDPPGFKFSDYSALATSVDKISQSYTVAIVKSKQVPENFFQWDISVHIYHSDTKTWVTSLTEVLMGWRGGDESVICNGVLHFLVYSTGGVPPENRHALIAYNISNRSSHCSLTRNFIPIPCPLTCGRLMNLKEKLVMVGGIGKHDRPDIIKGIGIWILNDKKWNEIARMPHKFFQGFGEFDDVFASSGTDDLIYIQSYGSPALLIFDMNHKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0718 506 CDD F-box_AtFBW1-like 146 182 - -
Glsi06g0718 506 FunFam F-box/kelch-repeat protein At3g61590 family 192 490 - -
Glsi06g0718 506 SUPERFAMILY F-box domain 145 245 IPR036047 GO:0005515
Glsi06g0718 506 ProSiteProfiles F-box domain profile. 146 187 IPR001810 GO:0005515
Glsi06g0718 506 SMART fbox_2 146 186 IPR001810 GO:0005515
Glsi06g0718 506 PANTHER F-BOX FAMILY PROTEIN 106 503 IPR045048 -
Glsi06g0718 506 FunFam F-box/kelch-repeat protein At3g61590 139 186 - -
Glsi06g0718 506 Gene3D - 190 491 IPR015915 GO:0005515
Glsi06g0718 506 NCBIfam F-box protein interaction domain 235 439 IPR017451 -
Glsi06g0718 506 Gene3D - 137 186 - -
Glsi06g0718 506 SUPERFAMILY Galactose oxidase, central domain 207 484 IPR011043 -
Glsi06g0718 506 Pfam F-box-like 146 185 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0718 Glsi-ChrGlsi06 7036830 7047305 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0718 06 7036830 7047305 Glsi06g0718 06 7036830 7047305 ECH