Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2229 ATGCTGGAAACCATCAAGCACCTGATGGGAGCCCCAGGCCCCAGCGGTTACGGCTCCAACTCCACGGCTGACCAAGTCACCGAACCCTGCTTCCATCTCCCCTCCCTCACCGCCATCATTACGGGAGCGACCTCTGGAATCGGAGCCGAAACCGCCCGGGTTCTGGCCAAGCGAGGTGTGAGGTTGATTCTCCCGGCTCGAACCCTCAAAGCTGCTGAGGACGCCAAAGCTCGCATCCTATCCGACTCTCCCCAATCCCACATCATTGTTATGACCCTTGATCTCAGTTCTCTCAATTCCGTTCGGAGCTTCGTGGCAGAGTTCCACTCCCTCGGTTTGCCTCTCCATCTTCTCATAAACAACGCCGGAAAGTTTGCCCACGAGCACGCAATCTCGGAAGATGGATTCGAAATGACCTTTGCGACGAACTATCTAGGTCATTTTCTATTGACCAACTTATTATTGGAGAGAATGGTAGAAACCGCAAAGAAGACAGGGGTGCAAGGAAGGATCGTGAACGTGTCCTCAAACGTACACGGGTGGTTTTCCGGCGATATCATCCCCTATCTGGCTCTTATAACACGGGACAAAAGCCATTACGACGCTACACGTGCTTACGCTCTATCCAAGCTTGCCAACATGTTGCACGCCAGCCAACTTGCTCTCATACTCCAGCAAATGGAGGCCAACGTGACTGTGAATTGCGTTCATCCGGGGATCGTGAGGACCAGACTCACCAGGGAACGCGAAGGCTTACTCACAGATTTGGTATTCTTTTTGGCTTCCAAACTCTTGAAGACGATTCCCCAGGCCGCGGCAACCACATGTTACGTGGCGACCCACCCAAGTCTGTTAAATGTGTCCGGCAAGTACTTTGCCGACTGCAATGAAGCTTCCACCTCAAAATTGGGATCCAGCTCAACCGAAGCTGCAAGGTTATGGAAGGCTTCCGAATTCATGATTTCTGGGGGTCCAAAAGTTCTGCTTGATCTGCTCAAAAACGCTGTATGA 1011 0.5223 MLETIKHLMGAPGPSGYGSNSTADQVTEPCFHLPSLTAIITGATSGIGAETARVLAKRGVRLILPARTLKAAEDAKARILSDSPQSHIIVMTLDLSSLNSVRSFVAEFHSLGLPLHLLINNAGKFAHEHAISEDGFEMTFATNYLGHFLLTNLLLERMVETAKKTGVQGRIVNVSSNVHGWFSGDIIPYLALITRDKSHYDATRAYALSKLANMLHASQLALILQQMEANVTVNCVHPGIVRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATHPSLLNVSGKYFADCNEASTSKLGSSSTEAARLWKASEFMISGGPKVLLDLLKNAV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2229 336 MobiDBLite consensus disorder prediction 1 21 - -
Glsi05g2229 336 Gene3D - 24 322 - -
Glsi05g2229 336 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Glsi05g2229 336 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Glsi05g2229 336 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Glsi05g2229 336 PRINTS Glucose/ribitol dehydrogenase family signature 163 179 IPR002347 -
Glsi05g2229 336 PANTHER RETINOL DEHYDROGENASE 14 318 - -
Glsi05g2229 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 298 IPR036291 -
Glsi05g2229 336 CDD retinol-DH_like_SDR_c_like 37 314 - -
Glsi05g2229 336 Pfam short chain dehydrogenase 37 178 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2229 Glsi-ChrGlsi05 68471175 68472711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2229 19 294 Acyl Lipid Metabolism Gene Families AT1G63380 26.897 3.24e-11 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2229 05 68471175 68472711 Glsi05g2229 05 68471175 68472711 ECH