Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2222 ATGGCGATCGCATCTCCATCAACTCCAAGCTTCTCAGCTTCTTTCTGCTCCGCTCGGACCGAATTGACTCGCCTCACTCCCTTCCCCTCTGTCTCCTTGTCTCTGTTTCGCAGAAACCAAACGCTCTCTTTTACTCGTCGGCTTGTCGTATCGTCCCGTCTCAATTCGTCTAAATCCTCCGATGCTGGCGGCTCTGTCTCGCCCGACAATGGAGATATCCCCTACGAGCTCCAACACGATTTTTCCCCTCAGCGTCAGAGGAGCGGATCGCCGGTATTCGTCACGCTTCCAGTGGATGCCGTGAGCCCTGAGGGGCAGGTTCTGAAGCCGAAAACTATGATGTTCTCGCTCCGGGCGCTCGCAGCTGCTGGAGTAGAAGGTGTGGTTTTGGAGATTTGGTGGGGTTTAGTTGAGAGGAACGAACCTAGGGCTTATAATTGGCGAGGTTATTGGGAACTCGTCATGCTGGCCGGGATGTGCGGCCTGAAGGTTCGAGCTGTCCTTGCGTTTCATCAGTGCGGCACGGGTCCTGGTGATCCTAATTGGATACCTCTTCCTCAATGGGTGCTTGATGAGATAAACAAGGATCCAGAATTAGCTTATTCTGACAGGTTTGGGAGAAGAAATATTGAATACATTTCACTTGGATGTGATATTCTTCCTGTGCTGTGTGGACGATCTCCCATTCAAGCATATGCTGATTTTATGAGGGACTTTAGGGACACCTTCAAGTCTTGTTTTGGCATTATCATAACAGGAGTACAAATTGGCATGGGTCCTGGTGGTGAACTAAGATATCCTTTATGCCATCCCAAGAAGTTAACACAGGCTGGGCCCCGTGAACTTGTGGAATTTCAGTGCTTTGATAAGTTTATGCTTGCATCTCTAAATGCTTGTGCAAGAGAGATTGGAATGCGTGAATGGGGATATGGTGTTCCACTTGGTGCTGGAAGTTTGATGCACAATCCTGAGAAGACTTTGTTTCTTGAAAGTGAGGATGGTTCTTGGAGCACGCCACATGTTAATTTTTTTCTTGAATGGTATTCGGGGATGCTGCTACTGCATGGAGAGAGAGTTTGTAGGGAAGCTGAAACTATATTTAGGGATACAGAAGTCAATATATCAGCAAAAGTAGCTGCCATTCACTGGCACTATGTCACGGATTCCCATCTATCCGAGTTAATGGCAGGCTATTACAATACTTCAAACAGAAATGGATACTTACCCATTGCTCGCATGTTTAGTAAGTATGGATTTAGTATGTGTTGCTCATGTTTTGAAATGCAAAATGCGGCAGTCAATAAGATAAACCGAGATGGTAGCCCTGAAGGTTTTCTTAGACAACTGTTGCTGGCTGCTAGGCTATGTGACATACCATTAGAAGGTCAAAACTTTTCATCTAATTTGGACGATAAAGCATTCGAGCAGGTGCTGAAGATGTCAAAGTTTTACTCAGATGGGATTGAAAAGCGTCCCTTCTCGTTCAACTTTGTGAGAATGGGCAGGAAGATGTTTGAACCTCGTTTTTGGGATCGGTTTACTCGTTTTGTGAGGCAAATGTCTAATGGGAATACTTTTCGAGCCAGATTAAATTCTGTAGGTGACGTACGCTTGAAGTCCACATCCGGGGTTGCAGAAGTGGGACTATTGTACCAGCTCTCTTAG 1665 0.4619 MAIASPSTPSFSASFCSARTELTRLTPFPSVSLSLFRRNQTLSFTRRLVVSSRLNSSKSSDAGGSVSPDNGDIPYELQHDFSPQRQRSGSPVFVTLPVDAVSPEGQVLKPKTMMFSLRALAAAGVEGVVLEIWWGLVERNEPRAYNWRGYWELVMLAGMCGLKVRAVLAFHQCGTGPGDPNWIPLPQWVLDEINKDPELAYSDRFGRRNIEYISLGCDILPVLCGRSPIQAYADFMRDFRDTFKSCFGIIITGVQIGMGPGGELRYPLCHPKKLTQAGPRELVEFQCFDKFMLASLNACAREIGMREWGYGVPLGAGSLMHNPEKTLFLESEDGSWSTPHVNFFLEWYSGMLLLHGERVCREAETIFRDTEVNISAKVAAIHWHYVTDSHLSELMAGYYNTSNRNGYLPIARMFSKYGFSMCCSCFEMQNAAVNKINRDGSPEGFLRQLLLAARLCDIPLEGQNFSSNLDDKAFEQVLKMSKFYSDGIEKRPFSFNFVRMGRKMFEPRFWDRFTRFVRQMSNGNTFRARLNSVGDVRLKSTSGVAEVGLLYQLS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2222 554 SUPERFAMILY (Trans)glycosidases 88 544 IPR017853 -
Glsi05g2222 554 Gene3D Glycosidases 81 545 - -
Glsi05g2222 554 Pfam Glycosyl hydrolase family 14 93 516 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 43 524 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 407 430 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 145 163 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 124 138 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 167 188 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 372 388 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 389 400 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 259 281 IPR001554 GO:0000272|GO:0016161
Glsi05g2222 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 336 355 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2222 Glsi-ChrGlsi05 68391872 68394720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2222 91 529 Glycoside Hydrolase AT3G23920 47.534 6.13e-142 420
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2222 05 68391872 68394720 Glsi05g2222 05 68391872 68394720 ECH