Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2220 ATGATTGTGTTGTGGCCTTGTAGCTGTACCACAGAATTGCTCTGGTGCCCTCCTTCCCGGAAAATCACGAACGTTTTGAATAATGACAAGTCTAGAAACCGTGACTTCAGCTTTTCAACCATGGCTGCTGCAGATATTGCTCGAACAGTAGTCGGTATCTTAGGAAACATCATCTCGGGCTTCTTGTTCTTGTCTCCCGTGCCGACTTTTGTGGGAATATGGAAGAAAGGATCAGTGGAGGAGTACTCGGCAGCACCATACCTCGCAACGCTGGCGAACTGCATGGTTTGGACGCTGTATGGACTACCCATAGTGCACCCAAATAGCCTGCTAGTAGTGACCATCAACGGCTCAGGGTGTGCCATAGAGGTCATCTATGTTGTGCTCTTCTTGATCTTCTCGGACCGCAGAAAGAGGGTGAAGGTCCTGGCGTGGCTCCTGCTGGAACTCACTTTCATCACCGCTCTCACCCTTCTCACATTAACTCTCGTTCATACTCTCAAGAAACGCTCTGCCATTGTTGGAACCCTATGCATTCTCTTCAACATTATGATGTATGCTTCCCCCTTTGCTGTTATGAAGCTAGTCATCACCACCAAAAGCGTTGAGTTCATGCCCTTTTTCCTCTCTCTCGCCTCTTTTGGCAATGGCGTAGCTTGGACCACTTACGCTCTCATCCGTTTTGATCCATTCATCACCATTCCGAATGGGCTTGGTACGTTGTTTTCGGTGGCCCAACTGATTCTGTATGCTACTTATTACAAGTCGACGAAGCGGCAGATAGCGGCAAGGAAAGCCCAAGGGGAAATGCATCTCTCAGAAGTGGTGGTTGGTGGCCAACACCACGCCAAGTGA 855 0.4912 MIVLWPCSCTTELLWCPPSRKITNVLNNDKSRNRDFSFSTMAAADIARTVVGILGNIISGFLFLSPVPTFVGIWKKGSVEEYSAAPYLATLANCMVWTLYGLPIVHPNSLLVVTINGSGCAIEVIYVVLFLIFSDRRKRVKVLAWLLLELTFITALTLLTLTLVHTLKKRSAIVGTLCILFNIMMYASPFAVMKLVITTKSVEFMPFFLSLASFGNGVAWTTYALIRFDPFITIPNGLGTLFSVAQLILYATYYKSTKRQIAARKAQGEMHLSEVVVGGQHHAK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2220 284 Pfam Sugar efflux transporter for intercellular exchange 173 257 IPR004316 GO:0016020
Glsi05g2220 284 Pfam Sugar efflux transporter for intercellular exchange 50 137 IPR004316 GO:0016020
Glsi05g2220 284 FunFam Bidirectional sugar transporter SWEET 49 139 - -
Glsi05g2220 284 FunFam Bidirectional sugar transporter SWEET 170 263 - -
Glsi05g2220 284 Gene3D - 167 259 - -
Glsi05g2220 284 Gene3D - 45 140 - -
Glsi05g2220 284 PANTHER RAG1-ACTIVATING PROTEIN 1 53 260 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2220 Glsi-ChrGlsi05 68379108 68385987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2220 42 276 Miscellaneous Gene Families AT4G10850 57.384 3.41e-91 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2220 05 68379108 68385987 Glsi05g2220 05 68379108 68385987 ECH