Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2199 ATGACTCTGGCCTCGTGTACTCCTTGCTTCTCTCGCTTTCTTCCTCCTCCTTCTTCATCTCTCCCTAAACTAAACGATACCTGTGCAATCCACTACAATACCACTTCTTTTCTGCCTTTTTTCTGTTATGCTTCCTTACTTCCTCCCCAGATTTCGAAATTCCTCACGGCTAAAGCTTCTGTGAGCGAGAGCCAGCATGAGATTTCAGTTTCACAGCTATTGGACCAAGAGTTGCTGGCTCGCGTTGCCGCCGCTAAAGACGCCAATGAGGCATTGCAGATGATCGCCGAAATTTCTACAAAAAATGTTGGTGTAGTATCCACGACTGATTGTTCTTCCATAATATCGGCTGCGCTTAATCGTAATAATGTGGACCTGGCCTTGTCGGTTTTCTTCGCTATGCGCGCCACTTTCAATCAAGTTGGTGAGAAGGACCCTTTGGTTAAGACATGGAAGTGGTCCAGGCCAAATGCTCACATTTACACAGTGTTAATTCACGGTCTGGCATCATCATTGAGGGTTTCTGATGCTCTTAGGGTGATTAAATATATTTGTGAAGTGGCAATATCTCCCGGAGAGGAGGTCCCTTTTGGAAAGATAGTGAGATGTCCTAGTTGTAGGATAGCTGTTGCTGTTGCCCAGCCACAACAAGGTATTCAGATAGTTTCGTGTGCAAAGTGTCGCTACCAATACGAACTTGTCTCGGGTGACATAATCAGTATTCAATCAGAAGAAATCAGCATGGATATTACGCCTTGGGAAAGGGGTTTAAGATTTCTGCAACTGATGAAGCAAAGCATTCCTGCTGCTGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTATGGCTCGTACACACAGATTTGCAACTGAAACGGTTGATCTACCAGCACAAGAAGGAGAAAGGGTAACTATTGCTGTGGCAGCTCCATCAAATGTCTATAGGGAGGTGGGCCCCTTTAAATTCAGTCCAAGGGCCCCTAATTTCTATCCTGGTGAGGCTATGTGCTTGACAAATCACAAAGATGGCCGAGAATCACCTCTTTTAAGAGCCCCAAGAAAAGAAGGAAGTTCATCATTATTTAATCCCTCCCTCCTCTTTCCTCTTCTTGCTGTGTTTGCAACTGGTGATGCTGCATCTGGACTTATTGACCCCAGCCTGCCCCAATTCCTATCAATTGTTGCAGTTTCATCTCTTGCTGTTGGTGCTACATTGAACTCTCTTGTTTTTCCCCAGTTGAATCAGCTTCCACAAGGATCAATAGAAGCAATTGCTATGAAACAGCAACTTTTATCTCAATATGATGTGCTTCAGTCTCGCATCAAAGACCTAAAAGAAGCTTCTGAAAAAGAGGTTTGGATGTTGGCTCGAATGTGCCAACTGGAGAACAAAATTTCTGCTGTTGGAGAACCTTCTTATCGGGCTCGGATAAGTAGAATCAAGAGGGTGCAAGAGAGCTTGCAAAATTCCCTGAGGGGACGGATTGAACTGATTGACAGCTATGCCAGAATCTCTTCTATGATTGAAATTGAGGTGGAGATGGACACTGATGTTCCTGCTGCTGAAACTGCTAGCAATGTGGATAGTATCATGGAACAGATAGAGCAAATCATGGAGCTTGAAAACCTAGAAGAGAGATGGAAAATACAAGCCGAAGCCAATGACGAGGCTGAAAGACTTCTTAGTGACCAGCCCTTACCTTCTGATGAAGTTTAA 1716 0.4452 MTLASCTPCFSRFLPPPSSSLPKLNDTCAIHYNTTSFLPFFCYASLLPPQISKFLTAKASVSESQHEISVSQLLDQELLARVAAAKDANEALQMIAEISTKNVGVVSTTDCSSIISAALNRNNVDLALSVFFAMRATFNQVGEKDPLVKTWKWSRPNAHIYTVLIHGLASSLRVSDALRVIKYICEVAISPGEEVPFGKIVRCPSCRIAVAVAQPQQGIQIVSCAKCRYQYELVSGDIISIQSEEISMDITPWERGLRFLQLMKQSIPAAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTIAVAAPSNVYREVGPFKFSPRAPNFYPGEAMCLTNHKDGRESPLLRAPRKEGSSSLFNPSLLFPLLAVFATGDAASGLIDPSLPQFLSIVAVSSLAVGATLNSLVFPQLNQLPQGSIEAIAMKQQLLSQYDVLQSRIKDLKEASEKEVWMLARMCQLENKISAVGEPSYRARISRIKRVQESLQNSLRGRIELIDSYARISSMIEIEVEMDTDVPAAETASNVDSIMEQIEQIMELENLEERWKIQAEANDEAERLLSDQPLPSDEV 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2199 571 Coils Coil 530 560 - -
Glsi05g2199 571 Coils Coil 427 447 - -
Glsi05g2199 571 Gene3D Tetratricopeptide repeat domain 72 197 IPR011990 GO:0005515
Glsi05g2199 571 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 48 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2199 Glsi-ChrGlsi05 68256391 68263614 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2199 05 68256391 68263614 Glsi05g2199 05 68256391 68263614 ECH