Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2176 ATGGCACACCCTTTTAAAGGCGACCCCTTCACCGAGAACCGCCGTGAGGAGGATGCCGGAGCTGCTTTCGTCCTTCAGTCAAAAGGTCAATGGTGGCATGCCGGTTTCCATTTGACGACGGCAATCGTGGGACCCACCATCCTGACCTTGCCGTATGCGTTCAGAGGATTGGGATGGGGATTGGGATTCTTGTGCTTAACGGTGATGGGGGTCGTCACCTTCTACTCCTATTACCTCATGTCCAAAGTGCTTGATCACTGTGAGCAATCCGGTCGCCGCCACATCCGTTTCCGGGAACTCGCTGCAGACGTCTTGGGGTCTGGATGGATGTTCTATTTTGTAATATTTATTCAAACGGCAATCAACACTGGGGTTGGTGTAGGAGCAATTTTGCTTGCGGGCCAATGCATTGAGATCGTGTACTCCAATATTTCGCCACATGGATCCCTCAAACTGTACCATTTTATAGCAATGGTGACGGTGATAATGATCATTCTATCTCAGCTTCCAACCTTCCACTCCCTCCGACACATCAACTTGTGTTCTCTGCTTTTCAGCCTCGGCTACAGTTTCCTGGTGGTTGGTGCTTGCATTCATGCAGGTACATTAGCAAATGCCCCTCCAAGGGACTATTCCTTAGAACCCCGAAAGTCTGCACGGGTTTTTAGTGCCTTCACTTCCATCTCTATACTTGCAGCAATATTTGGGAATGGAATACTACCCGAGATACAAGCAACGGTAGCGCCACCTGCCACTGGGAAGATGGTAAAAGGGCTTGTTATGTGTTATACTGTGATTTGCGTGACTTTCTACTCTGTTGCTGTGTCTGGATATTGGGTGTTTGGAAACAAGTCCAATTCAAACCTCCTAAAGAGTCTATTGCCAGATAATGGACCTTCTTTGGCTCCAACATGGGTGCTTGGGCTTGCAGTCATCTTTGTTCTTCTTCAGCTCTTCGCCATTGGCCTGGTTTATTCTCAAGTGGCATATGAATTAATGGAGAAGAAATCAGCCGATGTGAAGCAGGGGATCTTTTCCAAAAGGAACTTTATCCCTCGCCTAATTCTTCGGACAATTTACATGACATTATGTGGGTTTGTGGCAGCAATGCTCCCATTTTTTGGAGACATAAACGGTGTGGTTGGTGCTCTTGGCTTCATCCCTCTGGACTTCGTTCTGCCTATGCTTCTATACAACATGACACACAAACCTCCAAAATCATCCTTTACTTATTGCTTCAACATGTCAATTATAATTGTCTTCACGGGTGCAGGAATTATGGGTGCTTTCTCTTCTATAAGGAAACTGGTTCTTGATGCCAAACAATTTAAGCTCTTTAGCAGTGATGTCGTTGATTAA 1359 0.4628 MAHPFKGDPFTENRREEDAGAAFVLQSKGQWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFLCLTVMGVVTFYSYYLMSKVLDHCEQSGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGQCIEIVYSNISPHGSLKLYHFIAMVTVIMIILSQLPTFHSLRHINLCSLLFSLGYSFLVVGACIHAGTLANAPPRDYSLEPRKSARVFSAFTSISILAAIFGNGILPEIQATVAPPATGKMVKGLVMCYTVICVTFYSVAVSGYWVFGNKSNSNLLKSLLPDNGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYELMEKKSADVKQGIFSKRNFIPRLILRTIYMTLCGFVAAMLPFFGDINGVVGALGFIPLDFVLPMLLYNMTHKPPKSSFTYCFNMSIIIVFTGAGIMGAFSSIRKLVLDAKQFKLFSSDVVD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2176 452 PANTHER OS05G0424000 PROTEIN-RELATED 30 419 - -
Glsi05g2176 452 Pfam Transmembrane amino acid transporter protein 28 432 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2176 Glsi-ChrGlsi05 68117895 68121251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2176 1 452 Organic Solute Cotransporters AT5G41800 78.319 0.0 738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2176 05 68117895 68121251 Glsi05g2176 05 68117895 68121251 ECH