Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2132 ATGAAGTGCAGATCCGTGGCGTGCATATGGTCAGGCACGCCCCCACCTCACAGAGTTACCGCCGTCACCGCTTTCAGTCAATCGCCAACCTTCTACACTGGTGGATCCGATGGCTCCATCATTTGGTGGACCCTCTCCGATAATTATCCCAGCCCGGAAGTTAAAGCAGTCGGTATGTTATGTGGTCATGCGGCACCCATCACTGATCTCAGTATCTGTAGTCCTATCACAGCAGAAAAAAATACAGGGCGTTCAAGTAATTTGGTGGTTGATTCTGCTTCAAGTAATTTTGGTGCATTAATAAGTGCCTGTACTGATGGCTTCTTGTGTGTGTGGAGTAAAAGCAATGGTCATTGCCGGTGCAGGAGGAAATTGCCGCCTTGGGTGGGAAGTCCATGCATGATTCGAACATTGCCTTCAAGAGCAAGATATGTTTGTATTGGTTGTTCTTTCATGGACACTGTTCATTTGTCGGACCACTATCCAGTGAATTCAATGGAAGGAAATGAAGGACTAATGGATAGAGAAACTCATCCCAGGAAGCCCTCAAAATGCACAATCATTATTGTTGACACCTGTTCACTCACCATTACCCAAACCGTCTTTCATGGAAATCTATCTATTGGCCCCATGAAGTTTATGGCCGTAGTTTCAGCCGATAATGATAAAGATAGGCATTCTATTTTTGTGGCTGATTCAGTTGGTAAGCAACAGATGGTAACAGTATCAAAGGATCCTCATGATCATGGGGAAAGCTTGACAAGTTTGCACAAAGATACATATCAGTTGGAAAGTTCCGTTTGGGCTGAGGGATTGAGTGGCATGCAACAAACTATTTCAGTTGCAGCCCATGGGAATTTTGTTGCTTTTCTGTTGAAAGATCGCTGCATTTTTAGGTTATTGTCTAGTGATACTAAATTAGGAGAGATTTCTTTTGTGGATAATCTCTTTTGTTCTGATGGGCAGTCCACTCAAGCACATGTGACCGGGGCCATGTTTCTTGAAAGTGATGGAGTGGGAAATATGCTGAATACTCACGGTAACAGTTACTCGATTCCAGAGAATTTTGCTGTGTGGAATAATAGAGGTTATGCAATTGTTTATAAGTTGTCATTTCATAATGATGTTTTTCAGTGTGAGCCTCATTCTGAGATTCCTGCTACTTATTATAAGCCTGATGTGAGAGTATCCATTTTTTTCTTACAAGTGTATCATTATCTGCTTCGCATTGAATCAGTTTGCTTTCAATGTGACGAACCCTCACAATGGAGACCCCATGTCACGGTTTGGTCACTGCAGCATTTTGATAATGAGATTGGTAAATTTTCCCGGCAATGTAGAATGCTCAGGGAAGGCGATTCTTTCATTGACTGGTTTAAGAACTCTACTCAGCTCAAGGGATTGGGTGGTCTAGAGACAAAGTCAACTTCTACTTCAATTCTGAGTTTAGAAAATATACAGAGTGTAAATGATGGGGATAGCATAACTAATTATAAAGTTAACAAGACACAGATTGTTTCTTCTTCCATGATCATCTCTGAGAACCTCTTTACTCCTTATGCCGTTGTATATGGATTTCTAAGTGGAATAATAGAGGTTGTAAGATTTGATCTGTTTCAGGCGATATATTTTGATGGTGTAAGTTCCAAACCTGAGAAGCAATCAGCTGCATGCAAACAGTACTTCTCAGGGCACACAGGTGCTGTACTTTGCTTGGCAGCTCATCAAATGATGGGTAATGCCAAAGGTTGGAGTTTTAACCGGGTTTTGGTTTCTGGAAGCATGGATTGTACAGTTCGTATATGGGATCTTGACAGTGGCTGTCTTATTATGGTTATGCATCATCATGTAGCTCCAGTGCGCCAAATTATTCTTCCCCCATCTTTGACTGATCGTCCTTGGAGTGACTGCTTCCTTTCAGTTGGAGAGGACTCATGTGTTTCTCTTATTTCTCTTGAGACTCTGCAGGTGGAGAGAATGTTTCCTGGACACATTAACTATCCTTCAAAAGTTGTATGGGATGGAGCAAGAGGATATATTGCTTGTCTCTGCCAAACTCATTCTGGAACATCTGATGCCACTGATCTATTATACATTTGGGATGTAAAGACAGGTTGCCGCGAGCGGATCCTACGTGGGACAGCTGCACATTCTATGTTTGATCATTTTTGTAATAGCGTCAGCATGAATTCCATATCTGGCACATTGTTGAATGGAAATACATCAGTTTCTTCGTTACTTCTCCCAATAGTTGAAGATGGAAGGTTCTCTAATTCCTCCTCTAGTCTGTCAGAGAATTTGGTCACTTCATCTAGATCATCACCAAGCATTTCAATTATGGCTGAGATGAATGCTTCCCAAACTCACGCGGGCAAAGCAAATAAAGCTAAAGCAAATTCATCTTCTCTGTCTGCCCTCTGGAGTAAGAAGCTTCCTATCAAATGCTCTAGCCCATTCCCTGGTATTGTGGCTTTGAGTTTTGATCTTGCATCATTGATGTTCTCATATCAGAAACTTGAGTCCATGGTAAATGGAGGTTGTGAGCCAGTGAATATCAATTCAAAGCAGCAGGGAATTCAAAAACAAAGTCCCAGCCATCATGATCCAGAAAAACGTGAGGTCCTGAGAGATACTGTAGAGGGGCATGAATGGATTAAGCAATTTGAAGAATACTTACTTCGGTTTAGCTTGTCATTTTTACATTTGTGGGAGGTAGATACTGAGCTCGACAATTTGCTGATAAGTGACATGAAGCTGAAGAGACCAGAAAATTTTATAGTAGCTTCAGGTCTGCAGGGGGATAGAGGGTCTTTGACATTGACATTTCCTGGTTTGAGTGCTATTCTTGAGCTTTGGAAATCATCATCTGAGTTTTGTGCAATGAGGTCGTTGATGATGATATCCCTTGCCCAACGATTGATTAGCTTGTCTCACTCTGGTTCAGCATCCAGCAGTTCTTTAGCAGCATTTTACACTCGGAATTTCATGGAAAAATTTCCAGATATGAAGCCACCTTCATTACAGCTTTTGGTAGCTTTTTGGCAAGCTGAAAGTGAACATGTCCGTATGGCAGCACGCTCTTTATTTCATTGCGCAGCCTCTCATGCCATCCCAATACCTCTATGCAATTCAAACAGTACTGAGCCTACCAATATGAGCTCTCTAGCTGGAAGCAGATGCAAAGAGCAGGATAATACAAGAGCAGAAAGCAGATATTTTGAGGCCGAAAAACAAGGAATCTCCCAAACTGAGGAATCCAATGTAAATGCATGGCTAGAATCCTTTGAAGTGCAAGACTGGATTTCTTGTGTCGGGGGAACAAGTCAAGATGCAATGACATCTCATATTATTGTTGCTGCTGCATTGGCAATCTGGTATCCTAGTCTTGTTAAACCAAGTCTTGCCACATTAGTTGCTCATCCTTTGATGAAGTTGGCTATGGCCATGAATGATAAGTATAGCTCCACTGCTGCAGAGCTCCTTGCAGAGGGCATGGAGAGTACATGGAAAGAATGCATTGGGTCTGAGATACCTCGTTTGATTGGGGATATTTTTTTCCAAATAGAGTTGAGTGGGTCATCTACCAATTCTGTAGCAGAAATTCCAGCTGTATCAGTTTCTATTCAACAGTCTTTGGTTGAGATTCTTCTTCCAAGTTTAGCTATGGCTGATATACCAGGTTTTTTGACTGTGGTAGAAAGCCAAATATGGTCTACTGCATCTGATTCACCTGTCCACTTGGTGTCCCTGATGACTCTCATCAGGGTTATGCGTGGTTCTCCGAGAAATTTGGCTCAATACCTTGACAAGGTTAGTAAAGCAACTCGTGTTGCTGCATCTAGTGGGACAGATCTGCAGGTGGTCAATTTCATTTTACATACTATAGATCCAAGTAACTCGGTCATGCGGAAAACTTGCTTCCAGAGTTCAATGACAACTTTAAAGGAGGTTATACGTGTATATCCTATGGTTGTTATGAATGATGCATGGACCAGATTGGCAGTTGGGGATGTGATTGGAGAGACTAACAACGCAAGCATCAAGGTTTATGATATGCAAAGCATGACAATGATAAAGGTTTTGGATGCAAGTGGACCTCCTGGACTCCCAAGTTTTCTTGCAGCAGCATCAGAAACGATGTTAACTCCTGCTATTTCAGCTCTGAGCTTTTCGCCAGATGGAGAGGGGCTGGTTGCTTTTTCTGAACATGGACTGATGATCAGATGGTGGTCGTTGGGATCAGTCTGGTGGGAGAAACTAAGCCGGAACTTTATTCCTGTTCAGTGCACCAAACTAATTTTTGTTCCTCCTTGGGAGGGATTCTCTCCTAATTCATCCAGGTCAAGCATAATGGCTAACGTACTGGGAGCTGATGGACAGTCCAGCTATCAGGAGAATGCTAGGGATTCGGGTCATGGGAACAGTTTAAAGCAATTGCTTAATAATCTTGACCTCTCTTATCGACTAGAATGGGTTGGTGAACGGAAAGTACTCCTTACAAGGCATGGCCATGAATTGGGTACCTTCCAGTTGTAA 4536 0.4233 MKCRSVACIWSGTPPPHRVTAVTAFSQSPTFYTGGSDGSIIWWTLSDNYPSPEVKAVGMLCGHAAPITDLSICSPITAEKNTGRSSNLVVDSASSNFGALISACTDGFLCVWSKSNGHCRCRRKLPPWVGSPCMIRTLPSRARYVCIGCSFMDTVHLSDHYPVNSMEGNEGLMDRETHPRKPSKCTIIIVDTCSLTITQTVFHGNLSIGPMKFMAVVSADNDKDRHSIFVADSVGKQQMVTVSKDPHDHGESLTSLHKDTYQLESSVWAEGLSGMQQTISVAAHGNFVAFLLKDRCIFRLLSSDTKLGEISFVDNLFCSDGQSTQAHVTGAMFLESDGVGNMLNTHGNSYSIPENFAVWNNRGYAIVYKLSFHNDVFQCEPHSEIPATYYKPDVRVSIFFLQVYHYLLRIESVCFQCDEPSQWRPHVTVWSLQHFDNEIGKFSRQCRMLREGDSFIDWFKNSTQLKGLGGLETKSTSTSILSLENIQSVNDGDSITNYKVNKTQIVSSSMIISENLFTPYAVVYGFLSGIIEVVRFDLFQAIYFDGVSSKPEKQSAACKQYFSGHTGAVLCLAAHQMMGNAKGWSFNRVLVSGSMDCTVRIWDLDSGCLIMVMHHHVAPVRQIILPPSLTDRPWSDCFLSVGEDSCVSLISLETLQVERMFPGHINYPSKVVWDGARGYIACLCQTHSGTSDATDLLYIWDVKTGCRERILRGTAAHSMFDHFCNSVSMNSISGTLLNGNTSVSSLLLPIVEDGRFSNSSSSLSENLVTSSRSSPSISIMAEMNASQTHAGKANKAKANSSSLSALWSKKLPIKCSSPFPGIVALSFDLASLMFSYQKLESMVNGGCEPVNINSKQQGIQKQSPSHHDPEKREVLRDTVEGHEWIKQFEEYLLRFSLSFLHLWEVDTELDNLLISDMKLKRPENFIVASGLQGDRGSLTLTFPGLSAILELWKSSSEFCAMRSLMMISLAQRLISLSHSGSASSSSLAAFYTRNFMEKFPDMKPPSLQLLVAFWQAESEHVRMAARSLFHCAASHAIPIPLCNSNSTEPTNMSSLAGSRCKEQDNTRAESRYFEAEKQGISQTEESNVNAWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPSLATLVAHPLMKLAMAMNDKYSSTAAELLAEGMESTWKECIGSEIPRLIGDIFFQIELSGSSTNSVAEIPAVSVSIQQSLVEILLPSLAMADIPGFLTVVESQIWSTASDSPVHLVSLMTLIRVMRGSPRNLAQYLDKVSKATRVAASSGTDLQVVNFILHTIDPSNSVMRKTCFQSSMTTLKEVIRVYPMVVMNDAWTRLAVGDVIGETNNASIKVYDMQSMTMIKVLDASGPPGLPSFLAAASETMLTPAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNFIPVQCTKLIFVPPWEGFSPNSSRSSIMANVLGADGQSSYQENARDSGHGNSLKQLLNNLDLSYRLEWVGERKVLLTRHGHELGTFQL 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2132 1511 ProSiteProfiles Trp-Asp (WD) repeats profile. 562 612 IPR001680 GO:0005515
Glsi05g2132 1511 SMART WD40_4 1375 1411 IPR001680 GO:0005515
Glsi05g2132 1511 SMART WD40_4 555 603 IPR001680 GO:0005515
Glsi05g2132 1511 SMART WD40_4 53 113 IPR001680 GO:0005515
Glsi05g2132 1511 SMART WD40_4 5 44 IPR001680 GO:0005515
Glsi05g2132 1511 SMART WD40_4 654 701 IPR001680 GO:0005515
Glsi05g2132 1511 SMART WD40_4 606 651 IPR001680 GO:0005515
Glsi05g2132 1511 Gene3D - 471 823 IPR015943 GO:0005515
Glsi05g2132 1511 ProSitePatterns Trp-Asp (WD) repeats signature. 590 604 IPR019775 -
Glsi05g2132 1511 PANTHER RABCONNECTIN-3B, ISOFORM A 3 1511 - -
Glsi05g2132 1511 SUPERFAMILY WD40 repeat-like 14 715 IPR036322 GO:0005515
Glsi05g2132 1511 SUPERFAMILY WD40 repeat-like 1315 1414 IPR036322 GO:0005515
Glsi05g2132 1511 Pfam WD domain, G-beta repeat 558 603 IPR001680 GO:0005515
Glsi05g2132 1511 Gene3D - 3 294 IPR015943 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2132 05 67802849 67812998 Glsi05g2132 05 67802849 67812998 ECH