Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2096 ATGTCTGAACTCGAGACGTCGAATGTGAAATCGTGGGCTCTTCTAAAGCTCAAGATGGAACCTTTATTTCAAAGTTTAAAGCTTCAAGCCACTTTCCGTGTTAACTATTTTGAGAATTCAGCAAAAAGTAGCATCAGATTTAAGCATTTCCTTGCTCCAGAGGTCATTTTTCTAAAGAAGTGTTGCCCTTTATATCCTTCACTATCAAGGGTTAAGCAAGTGAACAACAGGAGGCTAATTTGTTCAGTTGCCACAGAGGACTTGCCGAAGCAAGTTGAAGAATCTAAAATGGAGACACCAAGAGAAATATTCTTGAAGGATTACAAGATGCCTGATTACTACTTTGACACTGTGGATCTGAAAATTTCCTTGGGTGAGGAGAGCACAATAGTTAGTTCAAAAATTACTGTGTTTCCTCGCATTGAAGGCTGTTCTCCCCCACTTGTCTTGGATGGACAAGACTTAAAATTAGTTTCAGTTCAGTTGAATGGCCAGGCAATGAAGGAGGAAGATTACCATCTGGATGCACGCCATCTAACAATCCAATCACCTCCTAGCAGTAAATTTGATCTAGAAATTGTAACTGAGATCTACCCGCAGAAAAACACATCATTAGAGGGACTTTACAAGTCATCTGGGAATTTCTGTACTCAATGCGAGGCTGAAGGATTTCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACATGTCGCATAGAGGCAGATAAATCATTATACCCAGTGTTGTTGTCTAACGGAAACCTGATTGAGCAAGGTGACTTAGAGAATGGAAAGCATTATGCTGTTTGGGAGGACCCCTTCAAGAAGCCTTGCTATTTGTTTGCTTTGGTCGCTGGACAGTTACAGAGCAGAGATGATACATTTATCACCCGCTCAGGACGGAAGGTATCCCTAAGGATCTGGACCCCTGCAGAAGACCTACCAAAGACTGTACATGCAATGTACTCTCTAAAGGCAGCTATGAAGTGGGACGAAGATGTTTTTGGTCTTGAATATGACTTGGATCTCTTCAATATTGTTGCTGTCCCTGATTTTAATATGGGAGCCATGGAAAACAAGAGTTTAAATATCTTCAATTCCAAGCTTGTCTTGGCATCTCCAGAAACTGCTTCTGATGTAGACTATGCTGCAATAATGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGTGACTGGTTCCAGCTTAGCCTGAAGGAGGGTCTCACTGTTTTTCGTGATCAGGAATTTTCTTCTGACATGGGAAGCCGTACTGTTAAGCGGATTGCTGATGTTTCTAAACTTCGAAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCTCATCCTGTGCGGCCACACTCTTACATTAAGGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACGTTACTGGGAAGTCAAGGGTTCCGGAAAGGCATGGATCTATATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTTTGCTGCAATGAGAGATGCAAATGATGCAGATTTTGCAAATTTCTTACTATGGTACTCTCAAGCTGGGACCCCTCTTGTCAAAGTAAATTCCTCTTACAATCCAGAAGCGCATACTTTTTCTTTAAAAATTAGTCAAGTGATTCCACCAACTTCAGGGCAACCAATTAAGGATCCCATGTTCATTCCTGTAGCAGTAGGTTTGCTTGATTCAACTGGCAAGGACATTCCTCTTTCGACTATATATCATGATGGAACTTTGCAGTCAGTTTCAAGCAATGATCAACCAGTCTACACCTCAGTTCTTCGAGTCACCAAGAAAGAAGAAGAGTTTGTGTTCTCTGATATATTTGAGAGGCCTGTTCCATCTCTACTACGTGGTTACAGTGCTCCAGTCCGCCTTGAATCTGATCTCACTGACAGCGACTTGTTTTTCCTACTGGCTAATGATTCAGATGAATTCAACCGTTGGGAGGCTGGGCAAATTCTGGCACGTAAGCTGATGCTCAGCTTGGTGGATGATTTCCAACATAATAAACCATTGGTTCTGAATCCAAAGTTTGTGGATGGTATCAAAAGTATTTTATCTGACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCGATGACTCTACCTGGTGAGGGAGAAATAATGGACATGATGGAGGTTGCAGATCCTGATGCTGTTCATGCTGTTCGAACTTTCATCAGGAAGCAACTTGCAAGTGAACTGAGAGCAGATTTCCTCAGCACAGTAAAAAATAATAGGAGCTCAGAAGAATATGTATTCAATCATCCTAACATGGCCAGGCGTGCTCTGAAGAATATTGCTCTTGCATATCTTGCGTGCCTTGAGGATCCAGAGTTCACCAACCTTGTGCTGCATGAGTATAAAACTGCTACAAATATGACTGAACAGTTTGCAGCTTTGGCAGCCATAGCTCAGAACCCTGGTAAAACTCGTGATGATGTTCTTGCTGACTTCTATAGCAAGTGGCAGCATGACTTCTTGGTGGTGAATAAATGGTTTGCCCTTCAAGCAATGTCTGACATCCCTGGTAATGTTGAGAATGTTCGGCAACTGTTAAATCACCCAGCATTTGACCTGCGTAATCCAAACAAAGTGTACTCACTCATTGGAGGTTTCTGTGGGTCTCCGGTGAACTTCCATGCGAAGGATGGATCAGGCTACAAGTTTTTGGGAGAACTTGTGCTGCAACTTGACAAGCTTAATCCTCAGGTTGCCTCACGAATGGTGTCAGCCTTCTCAAGATGGAGGTGTTTTGATGAAAGCAGACAAAAACTGTCTAAGGCCCAGCTGGAGATGATTATGTCTGCCAATGGACTGTCAGAGAATGTGTTTGAGATTGCCTCCAAAAGCTTGGCTGCGTAA 2928 0.4238 MSELETSNVKSWALLKLKMEPLFQSLKLQATFRVNYFENSAKSSIRFKHFLAPEVIFLKKCCPLYPSLSRVKQVNNRRLICSVATEDLPKQVEESKMETPREIFLKDYKMPDYYFDTVDLKISLGEESTIVSSKITVFPRIEGCSPPLVLDGQDLKLVSVQLNGQAMKEEDYHLDARHLTIQSPPSSKFDLEIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRIEADKSLYPVLLSNGNLIEQGDLENGKHYAVWEDPFKKPCYLFALVAGQLQSRDDTFITRSGRKVSLRIWTPAEDLPKTVHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDVDYAAIMGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPLVKVNSSYNPEAHTFSLKISQVIPPTSGQPIKDPMFIPVAVGLLDSTGKDIPLSTIYHDGTLQSVSSNDQPVYTSVLRVTKKEEEFVFSDIFERPVPSLLRGYSAPVRLESDLTDSDLFFLLANDSDEFNRWEAGQILARKLMLSLVDDFQHNKPLVLNPKFVDGIKSILSDSSLDKEFVAKAMTLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELRADFLSTVKNNRSSEEYVFNHPNMARRALKNIALAYLACLEDPEFTNLVLHEYKTATNMTEQFAALAAIAQNPGKTRDDVLADFYSKWQHDFLVVNKWFALQAMSDIPGNVENVRQLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGELVLQLDKLNPQVASRMVSAFSRWRCFDESRQKLSKAQLEMIMSANGLSENVFEIASKSLAA 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2096 975 FunFam Aminopeptidase N 110 293 - -
Glsi05g2096 975 Pfam Peptidase M1 N-terminal domain 112 285 IPR045357 -
Glsi05g2096 975 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 95 975 IPR012779 GO:0008270
Glsi05g2096 975 PRINTS Membrane alanyl dipeptidase (M1) family signature 412 424 IPR001930 GO:0006508
Glsi05g2096 975 PRINTS Membrane alanyl dipeptidase (M1) family signature 357 367 IPR001930 GO:0006508
Glsi05g2096 975 PRINTS Membrane alanyl dipeptidase (M1) family signature 393 408 IPR001930 GO:0006508
Glsi05g2096 975 PRINTS Membrane alanyl dipeptidase (M1) family signature 275 290 IPR001930 GO:0006508
Glsi05g2096 975 FunFam Aminopeptidase N 535 649 - -
Glsi05g2096 975 FunFam Puromycin-sensitive aminopeptidase 650 974 - -
Glsi05g2096 975 Gene3D - 535 648 IPR038438 -
Glsi05g2096 975 Gene3D Neutral Protease Domain 2 379 534 IPR027268 -
Glsi05g2096 975 Gene3D - 294 378 - -
Glsi05g2096 975 Pfam Domain of unknown function (DUF3458_C) ARM repeats 652 974 IPR024601 -
Glsi05g2096 975 Pfam Domain of unknown function (DUF3458) Ig-like fold 535 648 IPR035414 -
Glsi05g2096 975 Gene3D tricorn interacting facor f3 domain 110 293 IPR042097 -
Glsi05g2096 975 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 303 541 - -
Glsi05g2096 975 NCBIfam aminopeptidase N 107 973 IPR012779 GO:0008270
Glsi05g2096 975 CDD M1_APN 107 532 - -
Glsi05g2096 975 Pfam Peptidase family M1 domain 327 527 IPR014782 GO:0008237|GO:0008270
Glsi05g2096 975 Gene3D - 650 974 IPR037144 -
Glsi05g2096 975 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 100 291 IPR042097 -
Glsi05g2096 975 FunFam Putative aminopeptidase N 295 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2096 Glsi-ChrGlsi05 67570491 67579499 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2096 05 67570491 67579499 Glsi05g2096 05 67570491 67579499 ECH