Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2093 ATGCCGCCTTTTGCAGCGTCTCATTCCGATGGATCTCCACAGCCCAAATCAGACTCTAATATAGTCGCCATCGATGTGGGTGGCCAACTCTTCCAAACGACGAAGCAGACTCTAAATTCTGCCGGCTCTAAGTCCTTCTTCTTTAAAATCGCCCAGTCCGTATCTGAATCTCAACTCTGTACTCCTTTTGTCGACAGAGACCCTGAGTTGTTTGCTATACTCCTTTCCCTTCTCAGAACGGGTAATCTTCCGTCCAAGGCCAAAGCATATGATATACAAGATCTGATTTCGGAGTCCCAATTTTATGGCATCGACAACCTTTTGATGAATTCACTGTCGAGCCCTTCACAATTTGAAGCGTTCAACCTGGAGAAGTCGATTATTTTGCCTCTTAATGGACGAGATTCACCTTCCGCCATCTCCACTACACGTTATGGCTCCGTTCATGTCGCACATGGGAGTAAGATTACGTCTTTTGATTGGTCCCTTCGACGCAAGTCGACTATTTTGACCCATTTCTCGGCCGTCGATTCTTTATTAGCCATTTCGCCGTCCGTTGCGGCTGCGGGTGCCAATGACTATTCGGGGTTACAAATCATTGATTTGAAAAAGGGGGTTGTCAGGGAGACCTTAAACTGGGAGAACGTGACGAGGTCTGGTTCCACAGTCCAAGCAATTGGATCTTCGCCGGAGTACCTAATGGCCAGTTTTGAATCGGGTCGGCGCAATTCAAATTCAATCATGGTATATGATTTACATAGCCTAACCGCCGTTACAGAGATTGGTCACAATGAGATTTATGGTGCTGATATCGATTCCGCAATCCCAGCAACGAAATTGGAATGGGTATCGAATTATAATTTGCTAATGGCATCTGGGTCGCATAGCGGTCCTTCAGGAGTATTGGGTAACATAAGATTATGGGATGTACGGTCTGGAAATGTTGTTTGGGAATTGACAGAGAAGATAGACTGTTTTGCTGATGTCACAGTTTCAGATAACTTGTCAGCTATCTTCAAGGTTGGAGTAAATTCTGGCGAGGCATATTTTGTGGATTTGCGTAATTTAAGTGCTGAAAATTCCTGGACTTGTCTTGGTGACAAAAGAAAAGTGCTGAACGGGAGGAAGGAAGGCATGGGTTGCAAGATTGAGAACCAAGGAAATCAAGTGTTTTGCACCAAGGGAGGAGATATAGAACTGTGGTCAGAAGTTATAATGGGCTCTAAAAAGAATAGTGAGGATAGGTTAGAAGACAGGATGTTCAAGAAGAACTTGATGGGTAGAGTAAAGGACATGGGAGGTTCTAGGATTACCTCTTTGGCCTTTGGAGGGAATAAAATGTTCTTGACTAGGAAGGATCAGCATTGTGTTGAGGCTTGGCAGAGTTCTGCAAGAGAATTTTGA 1404 0.4452 MPPFAASHSDGSPQPKSDSNIVAIDVGGQLFQTTKQTLNSAGSKSFFFKIAQSVSESQLCTPFVDRDPELFAILLSLLRTGNLPSKAKAYDIQDLISESQFYGIDNLLMNSLSSPSQFEAFNLEKSIILPLNGRDSPSAISTTRYGSVHVAHGSKITSFDWSLRRKSTILTHFSAVDSLLAISPSVAAAGANDYSGLQIIDLKKGVVRETLNWENVTRSGSTVQAIGSSPEYLMASFESGRRNSNSIMVYDLHSLTAVTEIGHNEIYGADIDSAIPATKLEWVSNYNLLMASGSHSGPSGVLGNIRLWDVRSGNVVWELTEKIDCFADVTVSDNLSAIFKVGVNSGEAYFVDLRNLSAENSWTCLGDKRKVLNGRKEGMGCKIENQGNQVFCTKGGDIELWSEVIMGSKKNSEDRLEDRMFKKNLMGRVKDMGGSRITSLAFGGNKMFLTRKDQHCVEAWQSSAREF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2093 467 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 16 464 IPR045068 -
Glsi05g2093 467 CDD BTB_POZ_KCTD-like 22 102 - -
Glsi05g2093 467 Pfam BTB/POZ domain 22 111 IPR003131 GO:0051260
Glsi05g2093 467 SUPERFAMILY WD40 repeat-like 150 444 IPR036322 GO:0005515
Glsi05g2093 467 SUPERFAMILY POZ domain 21 113 IPR011333 -
Glsi05g2093 467 Gene3D Potassium Channel Kv1.1; Chain A 14 115 IPR011333 -
Glsi05g2093 467 Gene3D - 131 467 IPR015943 GO:0005515
Glsi05g2093 467 SMART BTB_4 20 119 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2093 Glsi-ChrGlsi05 67552199 67553602 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2093 05 67552199 67553602 Glsi05g2093 05 67552199 67553602 ECH