Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2089 ATGTGGTTGTTTAGTTGGAAAGGACCGTCAGGGTTCTCTGCCACTTCCACTGCGGAGGATGTTACTCAAGGCATTGATGGAACCGGTCTCACCGCCGTCGTTACAGGAGCATCAAGTGGACTTGGTCTTGAGACCACCCGGGTTCTAGCATTGCGTGGTGTCCATGTCGTTATGGCAGTAAGGAATGTGGAAACTGGTAGGAGTGTCAAAAACAAAATACTTGAGGCAATTCCCACGGCTAAAATTGATGTTATGGAGTTAGATCTCAGCTCCATGGCATCAGTGAGGAAATTTGCAGCAGATTACGATTCTTCTGGTCATCCTCTCAATATCCTCATTAATAATGCAGGTTTGATGGCTACTCCATTCATACTTTCCCAAGACAACATTGAGTTGCAGTTTGCAATAAATCATTTAGGTCATTTTCTCTTAACAAACCTTTTATTGGAAACTATGAAAAAAACTGTGCGTGACTGCAATCGGGAGGGAAGAATAGTCATTGTATCATCAGAGGCGCACAGATTTGCATATAGTGAAGGGATTTGTTTTGATAAGATTAACAATGAAATAGGGTACAACAGCTATTTTGCTTATGGACAATCAAAGCTTGCTAATATATTGCATGCAAATGAGCTTGCAAGGCGCTTGAAGGAAGAAGGAGTGGAGATAACTGCTAATTCCCTTCATCCTGGATCAATTGTTACAAATATTCTTCGTTATCACAGTTATGTTAATGTCGTTGCTAATATGGTCGGGAAGTACTTCCTTAAAAATGTGCAACAGGGAGCTGCTACTCAATGTTATGTGGCATTGCATCCACAAGTCAAGGAAATATCTGGTGAATATTTTATGGATTGCAATAAGGCAAAATCAGGTTCTCTGGCTAGAGATTCAGAGTTGGCGAGAAAACTATGGGAATTCAGCTTGAGCCTGACCAATCCAAAGTAG 948 0.4135 MWLFSWKGPSGFSATSTAEDVTQGIDGTGLTAVVTGASSGLGLETTRVLALRGVHVVMAVRNVETGRSVKNKILEAIPTAKIDVMELDLSSMASVRKFAADYDSSGHPLNILINNAGLMATPFILSQDNIELQFAINHLGHFLLTNLLLETMKKTVRDCNREGRIVIVSSEAHRFAYSEGICFDKINNEIGYNSYFAYGQSKLANILHANELARRLKEEGVEITANSLHPGSIVTNILRYHSYVNVVANMVGKYFLKNVQQGAATQCYVALHPQVKEISGEYFMDCNKAKSGSLARDSELARKLWEFSLSLTNPK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2089 315 Gene3D - 22 315 - -
Glsi05g2089 315 PANTHER RETINOL DEHYDROGENASE 9 312 - -
Glsi05g2089 315 Pfam short chain dehydrogenase 31 178 IPR002347 -
Glsi05g2089 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Glsi05g2089 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Glsi05g2089 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Glsi05g2089 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Glsi05g2089 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Glsi05g2089 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
Glsi05g2089 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2089 Glsi-ChrGlsi05 67531426 67534921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2089 33 183 Acyl Lipid Metabolism Gene Families AT1G63380 31.447 2.85e-09 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2089 05 67531426 67534921 Glsi05g2089 05 67531426 67534921 ECH