Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2083 ATGAGGGGATTGCAAATTTCAGCTTGTAACTGGTTTGTATTTAAGCATCATAGTCGTGCTGTTAGCGATATTGAAGCTGAGAACCATTTAATGCACCTTTGTCGCCCTTTGGCCCAAGACGAGGGTAGGCTCAATCGTGCATTGGTTTCCCGCAAGGGAGTTGCTTTTTCTATTATCAAGATATTGTCAGACTATATACTTCTTCAAGGAGATAAGAAAAGATTTGAGAAGATGTCTGGATGTAATAATTCATCTAAAAGTGATTGGAATTCAATCAAGTATTGGAGAAATCAACAAAGGGGACCATCTTTTGAAGCTGATCTTTCTTGCGTAAATTATTCACCCACTCTTTCCAAAAATGAGAATAAGCTATGCCACAGGAATTCTGAACTGAAGTCCCCTGAGATACTGAGCATGACTCCTCTCATCTCTGCAATAGGCCATGTATGGGATTCTGCAAGTCAAGCACTTTCATGTTTTGACCCTAAGGAAAATGGGAATCAAGATGATAAAGGCTTTGAGAATGAGAAAATTCTGGATAACTTTGAAAAGGAGCTTATGAGTGAGAAAATCTCATTTAAATTGGGAAATAAACATTGGTTGATGGGTAGGAATGCTTCTAAAGGAATAAAATATCCTGTCAAGGTCTCTGAGCCTCAGAACATGAAAACTGCTGTTCCAACGTCTGGGGGCTGCTTTTCATCAGATGCAAGCACCCCTGCATTGGCTAATGAAGGTGATGAGTGCAATCCTGATATAATCGCACATGATGTTCTACCATCATCTAGTGATGCAATTCTGGGCTCGAGAAAGTTTACATCTTTGTGTTCAGACTACTTTCTTAGAGCTGTGCATGATACTATGATAGATGTTGGCGGTAGTCAGATCCTATCTTCTAGTTTATGTGTGGATTATCATATTAACTCTTCAGCTACGTGTGATAGTGAATTTTTGGAGGCCCATCAAAGACATTTATCATATACCATAGCCAATGATGAATCTAAGGTTGAGGTCTCCTCAGCAAATCAGAAACCTAATTATTCCCTTGCCAAGCAAGAACATGCATTTTCTGGGGCATTGGCTGGTGTATGTGTCAGCCTTTGCCTGCATCCCGTTGATACAATTAAGACTGTCATTCAATCTTGCCGTGCTGAAAAGAAGTCCATTTTTTACATCAGCAAATCAATTGTTTCTGATAGAGGTTTTCCTGGACTTTATCGTGGAATTACTACAAGCATTGCATGTTCAGCTCCAATTTCTGCAGTATATACTTTTACCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTCCAAAAGGTAGCTTCTTTTTGTGTCTCAACTCATGTAACTGGTGGTTGTGCAAGCATTGCCACCTCTTTTATTTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAGGTTGGTTCTCATTATCGCAACTGCTGGTATGCCTCCGAGTTCCTTGTATCATCTGTACCAATCATACAATTCAAAACTGCTTTCAAGGATGCATGGGTTGAAATTATTAGGAAGGGTGGTTTTCATTCACTATATGCTGGTTGGGGAGCTGTACTGTGCCGGAATGTTCCACATTCAATTATCAAGTTTTACATATATGAAAAGTTGAAGCAAGTGACATCATCTTTGCCATCCAGTGGACGACCTAACACATTTCAGAGTTTAGTTTGTGGAGGATTAGCTGGATCAACTGCTGCTTTATTCACCACTCCTTTTGATGTGATTAAGACAAGATTACAGACACAGATTCCTGGAACTACAAATCAGTATCATGGTGTGTTTCATGGCCTTTGCAAAATAGGCAAAAATGAAGGTGTGAGAAGCCTGTACAGGGGATTGAGTCCAAGGTTGATTATTTACATGTCTCAAGGATCGCTGTTCTTTGCTTCGTATGAATTTTTCAAGAGGCTACTTTCTTTAGAAGCAGTGCATCCCACTGCTTTGGATGACAGAAAATATAAGAACTAA 1989 0.3967 MRGLQISACNWFVFKHHSRAVSDIEAENHLMHLCRPLAQDEGRLNRALVSRKGVAFSIIKILSDYILLQGDKKRFEKMSGCNNSSKSDWNSIKYWRNQQRGPSFEADLSCVNYSPTLSKNENKLCHRNSELKSPEILSMTPLISAIGHVWDSASQALSCFDPKENGNQDDKGFENEKILDNFEKELMSEKISFKLGNKHWLMGRNASKGIKYPVKVSEPQNMKTAVPTSGGCFSSDASTPALANEGDECNPDIIAHDVLPSSSDAILGSRKFTSLCSDYFLRAVHDTMIDVGGSQILSSSLCVDYHINSSATCDSEFLEAHQRHLSYTIANDESKVEVSSANQKPNYSLAKQEHAFSGALAGVCVSLCLHPVDTIKTVIQSCRAEKKSIFYISKSIVSDRGFPGLYRGITTSIACSAPISAVYTFTYESVKAALLPYLQKVASFCVSTHVTGGCASIATSFIFTPSERIKQQMQVGSHYRNCWYASEFLVSSVPIIQFKTAFKDAWVEIIRKGGFHSLYAGWGAVLCRNVPHSIIKFYIYEKLKQVTSSLPSSGRPNTFQSLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGTTNQYHGVFHGLCKIGKNEGVRSLYRGLSPRLIIYMSQGSLFFASYEFFKRLLSLEAVHPTALDDRKYKN 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2083 662 Gene3D Mitochondrial carrier domain 492 655 IPR023395 -
Glsi05g2083 662 ProSiteProfiles Solute carrier (Solcar) repeat profile. 443 546 IPR018108 -
Glsi05g2083 662 ProSiteProfiles Solute carrier (Solcar) repeat profile. 349 433 IPR018108 -
Glsi05g2083 662 SUPERFAMILY Mitochondrial carrier 353 641 IPR023395 -
Glsi05g2083 662 Gene3D Mitochondrial carrier domain 323 491 IPR023395 -
Glsi05g2083 662 ProSiteProfiles Solute carrier (Solcar) repeat profile. 556 644 IPR018108 -
Glsi05g2083 662 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 330 648 - -
Glsi05g2083 662 Pfam Mitochondrial carrier protein 353 434 IPR018108 -
Glsi05g2083 662 Pfam Mitochondrial carrier protein 557 646 IPR018108 -
Glsi05g2083 662 Pfam Mitochondrial carrier protein 447 546 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2083 Glsi-ChrGlsi05 67489001 67495385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2083 355 645 EF-hand Containing Proteins AT2G35800 27.055 1.58e-25 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2083 05 67489001 67495385 Glsi05g2083 05 67489001 67495385 ECH