Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2056 ATGGGAAAAAATGACCTTGAAAAGTCTGAAGCAACCAATATAAGAATCAGCAAGAACACAAGTAGCAATTCTCAGCAATTTTTAGAGAAAAGAAATGGACATCCTGAATGGTTACCTGATGGCTGGAATGTGGATTTCAGAACACGAAAAAGTGGTGCACATATGGGAGCTGGATATAAGTGTTACATTGATCCACTGAATGGATACAAATTCTACTCCAAACCTGAGGTATTACGATATCTTGAAACTGTAAAGGGCAGTAGCTGCACTTTCAACAAGGGGAAAGAATGCACAGCAGAGCATTCTCCAAGCAATCTGTCAACTGCAGCCAAAAGACAGAAACTGAAGCATTCTGCAACCAAACTACAGATTTTTGCTGGCAAAGAAGTTTCTGATAATGGCATCTTAGAATTGTCAAATAGTAACAGCTCAGAAAAAGGCCAAGATGTGAAGGTGTCTACTGAAGTTATGGTTGCTTCTGTTCCGACAGATGAAATTGCTGTCAAGATGCATTCACTGGAGGATGCAGCTGCAAACCCTCCTGAAATTAAAAAATATAATCCAGCTGATTTGCAAGAGAAGAATTATATTGCGAGTCTTATGGAGAATGCTAATGAAGAGAACTACATTAGCCCCAGCATATCCAAAAACAAGAAAGAGTTGAATGGGCCTTGCCGATTTTCGAGACGACTTGCTGGTATTAGACCTGACCAGGTGGCCAACACTGTGACCCATGAACAGGCACCTCAAGTTCCAAAGAGAAACTTAAGAAAAAGTAGAACCACTATAGACACTGATTTGGAAAATAAATCATCTCGGCAGCTGAATGTTGTCCCAAAAATCAAGCATGAGCATAAAATGCATGGAGAATTGCTCGACGAAAGAAGCAGTTCTTCTGAAAAAGAACTAGTTTTCAGTTATCAGCCGCGTCAGCTAGTAACAGAGAAAATAGATGACAAAAAGCTAGAACATCAGCATTCTTTATCTCAGGATTCAAGCTTATCAATCCTCAAGGCTGGAATGAAGACCATCATGGGTGAATTACCAGATATGGATAATCCTCATACTGGTCATAATTTGGCTTCTGAAACTAATATCCTAAAAGAAAACAATTTGCATGTTACTCAGACTGGAAAAAGTGGTTTGTGTGAAATTCGTGTTAACCTGAACAAATCCAGTAATAAGAAAGAGCATTGCAATCCATATCGGGCTTCAAAACGACTTGCTGGATTAGAACCTGAACTGAGCTCCAACTCCATAGACTGTAAAAGAGCTCCTGAATATAAGAGCAGGAGGTCTAAAGGTGAGGCCAATGCAGTATCAAAGCAATGTGAGGTTGGGCCAGCTAAGGAGCTTGCAGATCATGCTTCTACCTACATAAATGCACCAATAACTGGAGAGTCATCCAATAGAAGTAGAAAATCTCCTAAAATCCCATCCATTACCTACGAGCAATCAGGAAAGCTTGGAGATGAAGAAATGGATGATGAGAAATCAGAACCTCAGCTTTCCATTGCATTCCACTATTCTTGGTCTGATCCATGCTTGGAATTTGCAATTAAGACCGTCACAAGTGTGTTATCCAATGAGGATTCAGTTGGTAATGGGCCTATTTTGGCTCCTGAAACTGACTTGTCTGAAAAAAATAGGTTGTTTGAAAGTGCTAAAGAAAGCGGCATTGACAGAAATCCCCATGTAAATTTAAAGAAATCGAAGAACAAGAAAGAGCTGAGATTGCCTCGCCGGTTGTCAAAGCGACTTGCTGGCCATGAACCTGAGGTATTGCCTGCTGAAAGAGCTCTAGAATATGCCACTAGAAAATCATGCAAAGATGAACCAACTGACAAAGTAGTTTTGACCAATGGAGCATCTAAGCATCATGATGCTGACGAAGAAACAGAGCTTACTCTTCATGCATCCAACAGTTTGAAGTCAAAAGTATCTGGAGAATCACCAAACAAGAGTGAGAAGTCATATGAAGCCCAGATTATTCCCAAGGAGCAACAGCAGAAGCTTGAAACTGAGAAATTTGGTGATCTGAGATCAGAGACACAGCTCTGCTTACCCTTTGGAAAAGAAACAGAGCTTACTCTTCATGCATCTGACAGTTTGGAAACTAGAGTCCTTGAAGAATCATCAAGCAAGAGTGAGAAGTTATATGAAGCCCAAACTTTTCCCAAGGAGCAACAGCAGAAGCTTGAAACTGAAAATTTGGGTGATGTGAGATTAGAGACACAGCTCTGCTTACCGTTTGGGAAAGAAACAGAGCTTTCTCTTTATGCATCTGACAGTTTGGAAACCAGAGTACTTGAAGAATCATCAATTAAGAGTGAGAAGTCATATGAATCCCAAAATGCTCCCAAAGAGGAACAGAAAAAGCTTGAAACTGAAAAATTTAGTGATGGGAGATCAGAGACACAGCTCTGCTTACTGTTTGCGAAAGAAACAGAAGCAGAGCCTGATCTCCATGCATTTGACAGTTTGGAAACTGGAGTACTTGAAGAACCATCAAACATGAGTGAGAAATCTAATGAAGCCCAAACTGTTCTCAAGGAGCAACAACAGATGCTTGAAACTGAAAAAGTTTGTGATGTCAGAACAGAGACACAACTCTGCTTATCGATTGAGGAAAAAACAGAGCTTACTCTTCGTGCATCTAATAGTTTGGAAAGTAGAGCACTTGAAGAATCATCAAACAAGAGTGAGAAGATGTATGAAGCCCAAACTTTTCCCAATAAGCAACAGCAGAAGCTTGAAACTGAAAATGTTTGTGACGTGAGAATAGAGACACTGCTCTGTTCACCGATTGAGAAAGAAACAGAGCTCACTCTTCATGCTTCTGATAGTTTTGAAAGTAGAGTACTCGAAGAATCATCAAACAAGAGTGAGTCATCATATGAAGCCCAAATTGTTTCCTATGAGGAACAGTGGAAGCTTGAAACTGAAAATGTTTGTGATGTGAGAACAGAGGCTCTGCACTGCTTAACGATTGACAAAGAAACAGAGCTTACTCTTCCTGCATCTGATAGTTTGGAAAGTAAAGTACTTGAAGAACCATCAAATAAGAGTGACAATTCATTTGAAGCCCAAATTGTTGAAGAATCAAACAAGATCGAAAAGTCATATGAAGTGCAAACTGTTCCCAAGGAGCAACAGCAGAAGCTTGAAGGTGAAAATTTTGGTGATGTGAGGTCAGAGCCTCAACTCGGCTTATCATTTGGGGACTCTTGGTCAGATCCATCCCTGGAATTTGCAATCAAGACTCTCACGGGTGCATTGCCAGGGGATGCTGGTGCTGACATCTTGCCTGCTATGGCTCCTGAAATTAATAACCAACCGAATAAGGAATTGCTTGAGAGTGTGTTGGAGAGCATCAATGAAGAAAGTCCTGATAACTTGAACCAATCTCGAAACAAGAAAGACATTAATTTGTTGTTCCAGCCTTCAAAACAACTTCTGAAGCAGCCTGCGTTGAGGATGAACTCCAGATCTTGTGAAGATGCTCCTAAATTTGCAAATAGGTTGGCTTACGGTGATGAAGCCAATATAACAAGGAATTTGGATGAAGGAGAATCCCTACATATGGAAGCTGAGAACATAACAAAACTTGTGCATCATTCTAGAAATATAAACAAATTAATACATGAGGAGTCCTCAAAGAAAATTGAACAGGTTCTTGAGGGCGAAGCCCTTCCTGCTGAGCAACCACATTTTGAAATTCCAATTATAAACCAGGAGAAGCCTGAATCTCAGCTTTGTGATCCATTTATGGATTCTTGGTCAGACTCATGTCTGGAATTTGCATTTAAGACTCTTACGGGTGACATAACAGTGGAGGAAAATTTTGCAATTCTAGGAAGTTTACAGGAATCTACCAACTGGCATAGCCAGAGGGATGGTGACTCAACATTGCCGGATTTTGGATCTGGCAGCTTTTCTCAAAGTGATATCTCGTCATACTACTACGATATAGGGGAGAAATCAATGCCAGGGCAGCAGGCATCAATGAGCATTCAGGGTTGCGCTGTGGTTGATCCTCAACAACACGATTCTCAGAGCAATAAGAATTTTCAAGGAAGGTAA 4083 0.4053 MGKNDLEKSEATNIRISKNTSSNSQQFLEKRNGHPEWLPDGWNVDFRTRKSGAHMGAGYKCYIDPLNGYKFYSKPEVLRYLETVKGSSCTFNKGKECTAEHSPSNLSTAAKRQKLKHSATKLQIFAGKEVSDNGILELSNSNSSEKGQDVKVSTEVMVASVPTDEIAVKMHSLEDAAANPPEIKKYNPADLQEKNYIASLMENANEENYISPSISKNKKELNGPCRFSRRLAGIRPDQVANTVTHEQAPQVPKRNLRKSRTTIDTDLENKSSRQLNVVPKIKHEHKMHGELLDERSSSSEKELVFSYQPRQLVTEKIDDKKLEHQHSLSQDSSLSILKAGMKTIMGELPDMDNPHTGHNLASETNILKENNLHVTQTGKSGLCEIRVNLNKSSNKKEHCNPYRASKRLAGLEPELSSNSIDCKRAPEYKSRRSKGEANAVSKQCEVGPAKELADHASTYINAPITGESSNRSRKSPKIPSITYEQSGKLGDEEMDDEKSEPQLSIAFHYSWSDPCLEFAIKTVTSVLSNEDSVGNGPILAPETDLSEKNRLFESAKESGIDRNPHVNLKKSKNKKELRLPRRLSKRLAGHEPEVLPAERALEYATRKSCKDEPTDKVVLTNGASKHHDADEETELTLHASNSLKSKVSGESPNKSEKSYEAQIIPKEQQQKLETEKFGDLRSETQLCLPFGKETELTLHASDSLETRVLEESSSKSEKLYEAQTFPKEQQQKLETENLGDVRLETQLCLPFGKETELSLYASDSLETRVLEESSIKSEKSYESQNAPKEEQKKLETEKFSDGRSETQLCLLFAKETEAEPDLHAFDSLETGVLEEPSNMSEKSNEAQTVLKEQQQMLETEKVCDVRTETQLCLSIEEKTELTLRASNSLESRALEESSNKSEKMYEAQTFPNKQQQKLETENVCDVRIETLLCSPIEKETELTLHASDSFESRVLEESSNKSESSYEAQIVSYEEQWKLETENVCDVRTEALHCLTIDKETELTLPASDSLESKVLEEPSNKSDNSFEAQIVEESNKIEKSYEVQTVPKEQQQKLEGENFGDVRSEPQLGLSFGDSWSDPSLEFAIKTLTGALPGDAGADILPAMAPEINNQPNKELLESVLESINEESPDNLNQSRNKKDINLLFQPSKQLLKQPALRMNSRSCEDAPKFANRLAYGDEANITRNLDEGESLHMEAENITKLVHHSRNINKLIHEESSKKIEQVLEGEALPAEQPHFEIPIINQEKPESQLCDPFMDSWSDSCLEFAFKTLTGDITVEENFAILGSLQESTNWHSQRDGDSTLPDFGSGSFSQSDISSYYYDIGEKSMPGQQASMSIQGCAVVDPQQHDSQSNKNFQGR 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 622 659 - -
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 622 637 - -
Glsi05g2056 1360 SUPERFAMILY DNA-binding domain 35 115 IPR016177 GO:0003677
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 460 499 - -
Glsi05g2056 1360 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 96 IPR001739 GO:0003677
Glsi05g2056 1360 Gene3D - 1 124 - -
Glsi05g2056 1360 Pfam Methyl-CpG binding domain 36 86 IPR001739 GO:0003677
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 638 659 - -
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 461 482 - -
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 1331 1360 - -
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 1 33 - -
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 772 799 - -
Glsi05g2056 1360 PANTHER OS04G0193200 PROTEIN 17 107 IPR038945 -
Glsi05g2056 1360 MobiDBLite consensus disorder prediction 13 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2056 Glsi-ChrGlsi05 67351941 67357451 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2056 05 67351941 67357451 Glsi05g2056 05 67351941 67357451 ECH