Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2054 ATGAGATTGATGAAAGGCCTCTCTATATTCTCGTTCCTCGTCGTGGCTGTCTGCATGAGCTCCACAAGGGCAGCCAGATTTGATATCACAAACAGATGCCCCTACACCGTTTGGGCTGCAGCTGTGCCAACTGGCGGTGGCAGGCAGCTTAACTCCGGCGACACCTGGAGCATTGACGTGGCTGCGGGCACAGCAGGCGCTCGCATATGGGCCCGAACGAATTGCAACTTTGATGGGTCGGGTCGAGGACAGTGCGAGACGGGTGACTGCGGTGGCCTCCTTCAATGCCAAGCCTATGGCGCAGCTCCAGACACGCTTGCTGAATTTGCCCTTAACCAATATAACAATATGGACTTCTACGATATCTCACTGGTGGACGGATTTAATGTTCCCATGGAGTTCAGCCCAACGTCTAACGGATGCAGCCGCGCCATCCGATGCACTGCTGACATAAATGGACAGTGTCCCAATGAGCTGAAAGCTAAAGGAGGATGCAACAACCCCTGCACCGTGTTCAAGACTGATCGGTACTGTTGCAATTCTGGGAGCTGTGGACCTACTGATTATTCCAGATTCTTCAAGGATAGATGCCCAGATGCTTACAGTTACCCCAAGGATGATGCAACTAGCACATTCACATGCCCCGGAGGAACCAACTATAGGGTTGTTTTTTGCCCTTGA 681 0.5228 MRLMKGLSIFSFLVVAVCMSSTRAARFDITNRCPYTVWAAAVPTGGGRQLNSGDTWSIDVAAGTAGARIWARTNCNFDGSGRGQCETGDCGGLLQCQAYGAAPDTLAEFALNQYNNMDFYDISLVDGFNVPMEFSPTSNGCSRAIRCTADINGQCPNELKAKGGCNNPCTVFKTDRYCCNSGSCGPTDYSRFFKDRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2054 226 SMART tha2 27 226 IPR001938 -
Glsi05g2054 226 FunFam Thaumatin I 25 226 - -
Glsi05g2054 226 PIRSF PR5 1 226 IPR001938 -
Glsi05g2054 226 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Glsi05g2054 226 PRINTS Pathogenesis-related protein signature 46 55 IPR001938 -
Glsi05g2054 226 PRINTS Pathogenesis-related protein signature 68 79 IPR001938 -
Glsi05g2054 226 PRINTS Pathogenesis-related protein signature 81 110 IPR001938 -
Glsi05g2054 226 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Glsi05g2054 226 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Glsi05g2054 226 Pfam Thaumatin family 31 226 IPR001938 -
Glsi05g2054 226 ProSitePatterns Thaumatin family signature. 81 96 IPR017949 -
Glsi05g2054 226 PANTHER OS03G0233200 PROTEIN 14 226 IPR001938 -
Glsi05g2054 226 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
Glsi05g2054 226 SUPERFAMILY Osmotin, thaumatin-like protein 25 226 IPR037176 -
Glsi05g2054 226 Gene3D Thaumatin 25 226 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2054 Glsi-ChrGlsi05 67347436 67348116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2054 7 226 Receptor kinase-like Gene Family AT5G38280 36.992 2.46e-42 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2054 05 67347436 67348116 Glsi05g2054 05 67347436 67348116 ECH