Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2053 ATGGCTTCATCGGGGCAAACAATTTTGGTGACCGGAGGGGCCGGCTTCATCGGCTCTCACACCGTTGTTCAGCTTCTCAAAGATGGCTTTACCGTTTCCATCATTGATAACTTAGACAATTCCGTCATGGAAGCCGTGAATCGTGTTCGGGATTTGGTCGGTCCGGAGCTTTCGAAGAAACTCCAATTCATCCAAGGTGATCTCAGGAACATGGATGACTTGGAGAAACTGTTTTCTAAAACAAAATTTGACGCCGTGATCCACTTTGCGGGTCTAAAAGCTGTCGGAGAAAGTGTTACAAACCCCCTCCGGTATTTTGAATATAATTTAATCGGCACCATCAATCTCTATCAAGTAATGAAAAAGTACAACTGTAAGAAGATGGTGTTCTCATCATCTGCAACCGTTTATGGTGAGGCTAAAAAGATACCATGCGCTGAGGATTCCGAGTTGATGTCCGCGAGTCCTTATGGACGGACCAAGCTGATCCTGGAAGATATTGCTCGAGACCTTCAGAAGGCTGAGCCAGAATGGGGGATCATATTACTGAGATACTTCAATCCAGTTGGGGCTCATCAAAGTGGTAAAATTGGGGAAGATCCCAGGGGCATCCCAAATAACCTCATGCCTTACATCCAGCAAGTTGCTGTTGGAAGATTGCCCGAGCTTAACGTATATGGTCTTGATTATCCCACGAAGGATGGCTCTGCGGTTCGTGACTATATCCATGTAATGGACTTAGCAGATGGTCACATTGCTGCCGTGCGAAAGCTTTTCGCCACAAACAATATAGGTTGTACTGCTTACAACCTGGGAACTGGCCGTGGTACATCTGTGCTTGAAATGGTGGCGGCATTTGAAAAAGCTTCTGGCAAGAAAATTCCACTCAAGAAGTGTCCGAGGAGGTCAGGAGATGCTGTTGCTGTTTATGCATCTACAGAGAAGGCTGAGAAAGAACTCGGTTGGAAGGCAAAATATGGTGTAGATGAGATGTGCAGGGACCAGTGGTGTTGGGCAAGCAACAATCCCTGGGGCTACCAGGGGAAGAAATAA 1053 0.4653 MASSGQTILVTGGAGFIGSHTVVQLLKDGFTVSIIDNLDNSVMEAVNRVRDLVGPELSKKLQFIQGDLRNMDDLEKLFSKTKFDAVIHFAGLKAVGESVTNPLRYFEYNLIGTINLYQVMKKYNCKKMVFSSSATVYGEAKKIPCAEDSELMSASPYGRTKLILEDIARDLQKAEPEWGIILLRYFNPVGAHQSGKIGEDPRGIPNNLMPYIQQVAVGRLPELNVYGLDYPTKDGSAVRDYIHVMDLADGHIAAVRKLFATNNIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPLKKCPRRSGDAVAVYASTEKAEKELGWKAKYGVDEMCRDQWCWASNNPWGYQGKK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2053 350 NCBIfam UDP-glucose 4-epimerase GalE 8 343 IPR005886 GO:0003978|GO:0006012
Glsi05g2053 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 6 348 - -
Glsi05g2053 350 FunFam UDP-glucose 4-epimerase 4 282 350 - -
Glsi05g2053 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 347 IPR036291 -
Glsi05g2053 350 CDD UDP_G4E_1_SDR_e 7 338 IPR005886 GO:0003978|GO:0006012
Glsi05g2053 350 Gene3D - 197 339 - -
Glsi05g2053 350 Gene3D - 8 279 - -
Glsi05g2053 350 Pfam GDP-mannose 4,6 dehydratase 9 334 IPR016040 -
Glsi05g2053 350 FunFam UDP-glucose 4-epimerase 8 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2053 Glsi-ChrGlsi05 67343152 67344848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2053 5 323 Miscellaneous Gene Families AT4G00110 27.976 6.85e-25 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2053 05 67343152 67344848 Glsi05g2053 05 67343152 67344848 ECH