Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1937 ATGAGCACTGGGGAGCTTCTTGGCATCGAACCTCTCGAACTTAAGTTCCCTTTTGAGCTGAAGAAGCAGATCTCATGTTCCATTCAATTGTCAAACAAGACCGACAACTATGTAGCTTTCAAGGTAAAAACAACTAACCCGAAGAAGTATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCCACTTGTGACGTTATAGTTACCATGCAAGCGCAAAAAGAAGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAAAGTGTAAAAACAGATGATGTTGCCAGCCCAAAAGAAATCACTTCAGAAATGTTCAATAAGGAAGCAGGGCATGTGGTCGAGGAGTGCAAATTGAGAGTGGTGTATGTTCCTCCACCTCAACCACCATCTCCAGTTCCAGAAGGTTCTGAGGAAGGATCATCACCTAGAGGCTCTGTTTCAGAAAATGGAAATGTCGGTAGTGCTGACTTGACGACAGTAACAAGAACGTTTACTGAACGACATGAGGCTCAAGACAAATCCGCAGAGGCAAAAGCTGTCATCTCAAGGCTGACTGAGGAAAAGAATAATGCAATTCAACTAAATAACAAGCTTCGCCAGGAACTGGAGCTGCTGAGGCGCCATGGCAACCAAAATCGGGGTGGCGTTTCGATTGTGTTTGTCATCTTAATTGGCTTACTCGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.4394 MSTGELLGIEPLELKFPFELKKQISCSIQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVKTDDVASPKEITSEMFNKEAGHVVEECKLRVVYVPPPQPPSPVPEGSEEGSSPRGSVSENGNVGSADLTTVTRTFTERHEAQDKSAEAKAVISRLTEEKNNAIQLNNKLRQELELLRRHGNQNRGGVSIVFVILIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1937 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Glsi05g1937 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Glsi05g1937 241 MobiDBLite consensus disorder prediction 127 160 - -
Glsi05g1937 241 Coils Coil 170 211 - -
Glsi05g1937 241 MobiDBLite consensus disorder prediction 143 160 - -
Glsi05g1937 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Glsi05g1937 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Glsi05g1937 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Glsi05g1937 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Glsi05g1937 241 Pfam MSP (Major sperm protein) domain 9 112 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1937 Glsi-ChrGlsi05 66574727 66579129 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1937 05 66574727 66579129 Glsi05g1937 05 66574727 66579129 ECH