Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1790 ATGAAAGCAAGGAGAGGAAAACGCTCCGAGGCCTTTTGGCCTTCCCTTGTGATGAAGAAATGGTTAAATATAAAACCCAAGGTGTATGACTTTAGTGAAGATGAAGTGGACACTGAAACCGAGAGTGAAGATGATGCTTGCTCTGTTAAAGATTCAAGAATGCGCGTGCGTGAAGACGATACACATAGAGCACAAAGGATTCAATCAGTATTCCCAAGTCTATTATCAGATACATCTTCTAAGGGCTATAAGAAGGGACACAGAAGGGGAAAGTCCGAAACTCTGCGTGCACAGTACATAAATACGAAGGAATTGAGGGTAACAGTTGGCACTTGGAATGTTGCCGGAAGAGTTCCATGTGAGGATCTTGAGATTGATGACTGGCTTTGTACCGAAGAGCCTGCAGATATATATATTATTGGTTTCCAAGAGGTAGTCCCATTGAATGCTGGCAATGTTCTGGGAGCAGAAGATAATACACCCAGCCGAAAATGGGAGGCTATCATTCGAAGAACTCTAAACAAATCTTCTGAAACTGAAAGCAAACACAAAAGCTACAGTGCCCCTCCTTCTCCAGTATTACGAACTTGTTCGGCAGGTGATGTTCTAGCAGACAATATAGATGCTAATCCATTAGATATGATGGGTGAGGAGTACGTAAACACCATAGAAAATTATGAGATGGAAGAGCAGGAAGTGAAAAAGGCAATTAGTATAGGAAAGAATTTACAGTTGAGCAGAATATATGGGATTGATCTTCAGACTAGACTTGACTGGCCTGAACGTCCACTAGATGCAATCCCCCAAGTTGTTGACTCCGATTCAAAATTGCGGAGAGTACTAAGCAGCTCAGGCAGAACTGGGTTTAATTGGACAGAGAATAGTTTAAAATATGGGAGTGGGTTGAAGCGTTCACACCACAGTTATGGGAACCTTGGTTTGATCTGGAAAGAGCATAAAGTGATGCCTGAAGTAATTGATTCCGAATCTGATGTATCTGACATGTTATCCGATGAGGAAGACGATACTTTCATTGAATTTCCAAAGAACCAAGAGGATTATGGATTAGGCACCGGGAAATCACGTCCTGGATATGTCCGGATTGTCAGCAAGCAGATGGTCGGGATTTATGTATCGGTTTGGGTGCAGAGGAGGTTGAGAAGGCGTATTAATAACTTGAAAGTTTCACCTGTTGGAGTTGGTCTAATGGGATACATGGGAAACAAGGGGTCAGTTTCAGTTAGCATGTCTCTCTTTCAGTCACGTCTGTGCTTTGTTTGTTCCCATCTGACTTCTGGTCAAAAGGATGGAGCTGAACAGAGGCGAAACTCCGATGTTCATGAAATTCTACGACGCACCCGCTTCTCATCTGTCTTTGATACAGATCAGCCGGAAACAATCCCATCTCATGAACAGATTTTCTGGTTCGGAGATTTGAACTATCGAATCAGTATGTTGGATGTGGAGGTAAGGAAGCTGGTGGCTCTAAAAAAGTGGGATGAACTGATGAATAATGATCAGCTAAGTAAAGAACTGCGTCATGGGCATGTGTTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCTCCCACTTATAAGTATGAAATTAATTCTGACAGATATGTTGGTGAGAACCCAAAAGAGGGGGAAAAGAAGAGATCTCCAGCCTGGTGTGATCGTATATTGTGGCTAGGAAGAGGAATAAAGCAACTTTCATACGATCGTGCAGAAATAAAGATGTCAGATCATAGACCAGTTAGCTCAATCTTCTCAGTTGAAGTTGAAGTATTTGATCATCGCAAGCTACAGAGAGCTCTAAATTTCAATAGTGCAGTAGTACACCCAGAGGTCTTTCTTGATGAAGATGGGGATCTATAA 1878 0.4228 MKARRGKRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDACSVKDSRMRVREDDTHRAQRIQSVFPSLLSDTSSKGYKKGHRRGKSETLRAQYINTKELRVTVGTWNVAGRVPCEDLEIDDWLCTEEPADIYIIGFQEVVPLNAGNVLGAEDNTPSRKWEAIIRRTLNKSSETESKHKSYSAPPSPVLRTCSAGDVLADNIDANPLDMMGEEYVNTIENYEMEEQEVKKAISIGKNLQLSRIYGIDLQTRLDWPERPLDAIPQVVDSDSKLRRVLSSSGRTGFNWTENSLKYGSGLKRSHHSYGNLGLIWKEHKVMPEVIDSESDVSDMLSDEEDDTFIEFPKNQEDYGLGTGKSRPGYVRIVSKQMVGIYVSVWVQRRLRRRINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEQRRNSDVHEILRRTRFSSVFDTDQPETIPSHEQIFWFGDLNYRISMLDVEVRKLVALKKWDELMNNDQLSKELRHGHVFDGWKEGLINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGRGIKQLSYDRAEIKMSDHRPVSSIFSVEVEVFDHRKLQRALNFNSAVVHPEVFLDEDGDL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1790 625 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 610 IPR045849 GO:0004445
Glsi05g1790 625 FunFam Type I inositol polyphosphate 5-phosphatase 2 85 197 - -
Glsi05g1790 625 FunFam Type I inositol polyphosphate 5-phosphatase 2 302 616 - -
Glsi05g1790 625 Gene3D Endonuclease/exonuclease/phosphatase 324 615 IPR036691 -
Glsi05g1790 625 SUPERFAMILY DNase I-like 96 611 IPR036691 -
Glsi05g1790 625 Gene3D Endonuclease/exonuclease/phosphatase 87 189 IPR036691 -
Glsi05g1790 625 SMART i5p_5 326 598 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1790 Glsi-ChrGlsi05 65605699 65610153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1790 365 598 Acyl Lipid Metabolism Gene Families AT1G65580 32.246 4.53e-34 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1790 05 65605699 65610153 Glsi09g0277 09 1998756 2003566 CCT