Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1630 ATGGCCACCGACTTTAGTTTCATCCCCATAATTGATATTAGTCCCCTTTTAGCCAAGTCTGATGACCCTGAAATGGCTGAGGACCCTGGTGTGTGTGAGGTTGTTAGACAATTGGATCAGGCTTGTAAAGAGGCAGGGTTCTTCTACGTGAAAGGTCATGGCATTCCCGATACTCTCCTCAAAGAGGTTAAAGATGCAGCACGCAGATTCTTTCAACTTCCATATGAAGAAAAGACAAAGATCAAAATGACTGCCGCTACTGGGTTCAGAGGATATCAGATGATTGGAGAAAACATAACTAAAGGCGTACCTGATAAGCATGAAGCTATTGACAGCTATAAGGAGTTGACGAAGGGCGTGTATGGAACTCTCGGCAAACCATTGGAAGGATGCAACAAGTGGCCAAAAAATCCCTCGAACTTTAAAGTTCTTATGGAGGAGTATATTAGTCTCTGCACAGACCTTGGAAGGAAAATTATGTGCGGAATTGCTTTAGCATTAGGTGGATCACCAGATGAATTTGAAGGTCAGAGAGCTGGGGATCCATTTTGGGCTATGCGACTCATTGGCTACCCAGGTGTATCTACTGCAAATGGAACAGATGTTCTGAAGAATGACGTTGGATGTGGAGCTCACACTGATTATGGTTTATTGACATTGGTTAATCAGGACGATGATATAAACGCACTCCAGGTGAGAAACCTCAGCGGCGACTGGATATCAGCGCCTCCAGTTCCTGGGTCATTTGTGTGCAACATCGGTGACATGCTGAAGATATACTCCAATGGTTTATACGAGTCAACTTTGCATCGGGTGATAAACAATTCCCCAAAATACAGAGTGAGCGTAGTATATTTTTTTGAGACAAACTTTGATACAGCAGTAGAGCCATTAGATACATATAAAACGAGGGCAAATGGCACCAAGAAGTTTGAAAGAGCTGTGTATGGAGAGCATCTAGTTAACAAGGTCACAACCAACTTTGTTGACATCTGA 996 0.4317 MATDFSFIPIIDISPLLAKSDDPEMAEDPGVCEVVRQLDQACKEAGFFYVKGHGIPDTLLKEVKDAARRFFQLPYEEKTKIKMTAATGFRGYQMIGENITKGVPDKHEAIDSYKELTKGVYGTLGKPLEGCNKWPKNPSNFKVLMEEYISLCTDLGRKIMCGIALALGGSPDEFEGQRAGDPFWAMRLIGYPGVSTANGTDVLKNDVGCGAHTDYGLLTLVNQDDDINALQVRNLSGDWISAPPVPGSFVCNIGDMLKIYSNGLYESTLHRVINNSPKYRVSVVYFFETNFDTAVEPLDTYKTRANGTKKFERAVYGEHLVNKVTTNFVDI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1630 331 PRINTS Isopenicillin N synthase signature 38 55 - -
Glsi05g1630 331 PRINTS Isopenicillin N synthase signature 212 233 - -
Glsi05g1630 331 PRINTS Isopenicillin N synthase signature 158 174 - -
Glsi05g1630 331 PRINTS Isopenicillin N synthase signature 277 295 - -
Glsi05g1630 331 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 303 - -
Glsi05g1630 331 FunFam Probable 2-oxoglutarate-dependent dioxygenase At3g49630 3 328 - -
Glsi05g1630 331 Gene3D - 1 329 IPR027443 -
Glsi05g1630 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 137 IPR026992 -
Glsi05g1630 331 Pfam 2OG-Fe(II) oxygenase superfamily 204 289 IPR044861 -
Glsi05g1630 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 182 289 IPR005123 -
Glsi05g1630 331 SUPERFAMILY Clavaminate synthase-like 4 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1630 Glsi-ChrGlsi05 64596987 64600373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1630 29 290 Glycosyltransferase AT5G59530 27.037 4.07e-17 79.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1630 05 64596987 64600373 Glsi09g0434 09 2965376 2966317 CCT
Glsi05g1630 05 64596987 64600373 Glsi09g0434 09 2965376 2966317 ECH
Glsi05g1630 05 64596987 64600373 Glsi05g1630 05 64596987 64600373 ECH