Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1530 ATGCCAGATCCGACGTGGCAATGTGGTTCAAATCACGAGGTCGGCCCCTCCCTATATATACTCCACTCCCTCTTTCTTTCCTTTCCAACTAATGATGCCCCGGAGGCCACCACCTTCCCAGATTTAAACCAATCCCACTCAGCGAACTTAGAAATGGGTAATTGCAGCACCTCCTCTTCGACGGCCGTGGCCACCGCAAAACTTATTCTACCGGACGGAAGGCTCCAAGAGTTCTCCTACCCGATTAAGGCTTCTTACGTATTGCAGAAGTACCCGATGTGCTTTATATGTAACTCCGACGAGATGGACTTCGACAACGTCCTCACCGCAATCGACGATAACGAAGAGTTACAACCTGGACAGCTTTATTTTGCTTTGCCGACGAGTCGGTTAAAGCACCCCTTACTGGCCGAGGAGATGGCTGCATTGGCGGTGAAAGCCAGCTCCGCGCTCATGAAAACTAGTGGTGGTGAGAAATGCGGTTGTGGCCGGAAACAGATTGTGTTTTCCGTCGGCGAGAAGGGTAAATATTATAAAAGAGTGTCTCCGGGAGTCAGTGGTGGTGACAGGTCGAGGAGAGGGAGGAATAGGAGTGGTGGTGGCGGGGGAAAGTTTACGGAGATATTGAGTGCAATACCGGAGTAG 645 0.5116 MPDPTWQCGSNHEVGPSLYILHSLFLSFPTNDAPEATTFPDLNQSHSANLEMGNCSTSSSTAVATAKLILPDGRLQEFSYPIKASYVLQKYPMCFICNSDEMDFDNVLTAIDDNEELQPGQLYFALPTSRLKHPLLAEEMAALAVKASSALMKTSGGEKCGCGRKQIVFSVGEKGKYYKRVSPGVSGGDRSRRGRNRSGGGGGKFTEILSAIPE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1530 214 MobiDBLite consensus disorder prediction 182 206 - -
Glsi05g1530 214 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 52 178 - -
Glsi05g1530 214 Pfam PADRE domain 52 198 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1530 Glsi-ChrGlsi05 63829152 63829796 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1530 05 63829152 63829796 Glsi09g0512 09 3536960 3537463 CCT