Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1512 ATGGCGCCTTCTTACTGTGTGAGGGAGAGGAAGCCGTGCGTGGCTTGGGTTGAGAAGTACTTCAAGGACTGCCTCTGTAATCGTAAAGATGACTTCTCCTTCTCTTTTGGGCTCATCAGTCTGGTATGCTGGGGGGCGGCAGAAATCCCTCAGATCATCACCAATTTTCAAACCAAGTCCAGCCATGGAGTTTCCCTTGCCTTTCTCCTCACATGGATTGCTGGTGATATATTCAATCTGGTGGGTTGTTTCCTGGAGCCAGCCACGTTGCCCACCCAGTTGTACACAGCTCTGCTGTACACAATAAGTACTGTCGTATTAGTGCTGCAAAGCCTGTACTATGATTACATTTATAGATGGTGCAAATCTCGTCAAAAAGTCAACAACGACGAGGAGGAAGAAGGGAAAAAACCATTGAAACCAAAACCAAGTGATCATGATTGTGGAGTTCCAATCCCAAATGGCACACCTAAAACGGCACCTCGTAGGGAGTTCTACTACACGTCAGCGAGATCAATGGCTGGGAGTGGTACCCCACCGTTTCGAAGCTACATGAGAGCTGCTAGAAGCGGGCCATCAGCCATGGAATTCAACAACGACTCCTCCTCTGACGATGACGCTCCTTCATTTTCCTCTCACAAGTCTCCTTCTCATTCCCAACCTAGGCCCATCCCACGTTCTTTCGCTGGAGGTTATGGAACAATTCTAGCAGCATCGGTTAACTTGCCCCTACAGGGTAATGCTTTAAGAGATGGATATATAGGACTTGCTGAAACCAAACTCTTACAGCAGCATGAGATGCATAGTGCTTTTGGTCAATGGTTGGGATGGCTCATGGCGGCTATATACATGGGCGGCCGCCTCCCTCAAATATGGTTGAATATTAAAAGAGGGAGTGTGGAGGGCTTAAACCCTCTCATGTTCGTCTTTGCATTAATTGCTAATGTCACCTATGTGGGAAGTATTCTTGTACGAACTACTGAATGGGGAAACATCAAAGCCAATATGCCATGGTTGTTGGATGCTGCAGTTTGCGTGGCCCTGGACCTATTTATAATATTGCAGTACATCTATTATAGATACCTGCGAAGGAGAGCAGCAAGAGATGATAACTTTGGAGAGTACGAAGAAGCAAGTAAAGCTTGA 1146 0.4668 MAPSYCVRERKPCVAWVEKYFKDCLCNRKDDFSFSFGLISLVCWGAAEIPQIITNFQTKSSHGVSLAFLLTWIAGDIFNLVGCFLEPATLPTQLYTALLYTISTVVLVLQSLYYDYIYRWCKSRQKVNNDEEEEGKKPLKPKPSDHDCGVPIPNGTPKTAPRREFYYTSARSMAGSGTPPFRSYMRAARSGPSAMEFNNDSSSDDDAPSFSSHKSPSHSQPRPIPRSFAGGYGTILAASVNLPLQGNALRDGYIGLAETKLLQQHEMHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALIANVTYVGSILVRTTEWGNIKANMPWLLDAAVCVALDLFIILQYIYYRYLRRRAARDDNFGEYEEASKA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1512 381 FunFam Vacuolar membrane PQ loop repeat protein 271 369 - -
Glsi05g1512 381 SMART ctns 46 77 IPR006603 -
Glsi05g1512 381 SMART ctns 285 316 IPR006603 -
Glsi05g1512 381 MobiDBLite consensus disorder prediction 192 224 - -
Glsi05g1512 381 MobiDBLite consensus disorder prediction 194 222 - -
Glsi05g1512 381 Gene3D - 272 371 - -
Glsi05g1512 381 Gene3D - 35 133 - -
Glsi05g1512 381 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 363 - -
Glsi05g1512 381 MobiDBLite consensus disorder prediction 129 144 - -
Glsi05g1512 381 Pfam PQ loop repeat 272 328 IPR006603 -
Glsi05g1512 381 Pfam PQ loop repeat 32 88 IPR006603 -
Glsi05g1512 381 MobiDBLite consensus disorder prediction 129 161 - -
Glsi05g1512 381 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1512 Glsi-ChrGlsi05 63697624 63700905 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1512 05 63697624 63700905 Glsi05g1512 05 63697624 63700905 ECH