Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1494 ATGGCCGACACACTCTCTGCTTTGAGGTCTTCAATGGCTTCTCACTCTCCGCCTCTTGATGCCTTAGTCGTACCCTCTGAAGATTATCATCAGAGCGAATTTGTATCTGCACGGGACATGAGGCGCGAATTCCTTTCCGGATTCACTGGAAGTGCTGGTTTGGCACTTGTAACAAAGAACGAAGCCCTTCTGTGGACAGATGGACGGTATTTTTTGCAGGCAACACAACAACTTAGTGATCAGTGGAAGCTAATGCGTATTGGTGAAGATCCTACTGTAGATATCTGGATGGCTGATCACACAAAGGGACGCCCCCAACCCCCTTCTGATTATGATCACATCATTTCATATGTTGCTTCCAAGTGGTCCTTTGTCTCATGTCGTTCTGTTGCAGATAAGTTGAGAGATTTAAGAGAAAAGCTTATGCAGGAGAAAGCTCGTGGTATAATTGTCACAACACTTGATGAGGTTGCATGGTTGTATAATATTCGTGGGAGTGATGTGGCGTACAGTCCTGTTGTTCATGCATTTGCTATTGTGACATCAAATTCAGCTTTCTTTTACGTGGACAAGCGAAAGTTGTCTGTTGAGGTAAAAACCTATTTAGAAGATAATGGAATAGAAGTTAAAGAGTATATGGCAGTGAGCACCGATGTGGTATTGCTTACATCTGATGAACTTAATGCTGGGGCTGCTGTAAGAGGCACTCCAGCTGAAGTTACTACAGAAGTGAAAAAATCTCTAAGTGAGACTGATAGAAGAGTAAATGGTAATCGTCAAGCAGAAGAACGTAGTAATGACCTCATATGGGCTGATCCAGGCTCATGCTGCTATGCACTGTATTCAACATTGAGCCCTGATAAGGTTCTCCTGCAGCAGTCACCTTTGGCCCTCGCGAAAGCTTTAAAGAACCAAGTGGAATTGGATGGGTTAAGAAAGGCACAAATTCGGGATGGTGCAGCTGTTGTGCAATATCTTGTCTGGTTGGATAAGAAGGTGTTGAATGATGATGCATTAGCTTGGTTTGATGTGCAGATGCAGGATAGTTATGGGGCTCTTGGTTACTTTTTGGAGGGGCATAAAGCGAACAAGGAAAACCATTTTTTTCATTTTGCAATGGACTCCAGGGAGGTACCGGTCGGGGTAACCATTGTAGTTTCACTTGCTTTTGGGGGTCTTATTGACAGCACCTGCTACCACACAGTTCAATTGATTGTCTGGAATATGAATAATTTCAGAGGATTGAGTTTCCCAACTATTTCTGCAGTTGGTCCAAATGCTGCAATCATTCATTATTCTCCACAGGCGGGAACATGTGCCGACCTTGATCCAGACAAAATTTATCTTTTTGATTCTGGAGCGCAGTATCTAGATGGAACAACCGATATAACACGGACAGTTCATTTTGGAAAACCTTCGGCACATGAGAAAGCATGCTACACGGCAGTCCTTAAGGGTCATATTGCTCTTGGAAATGCTAGGTTTCCTAATGGGACAAATGGTCAAGCTCTTGATATTCTTGCTCGAATTCCTCTGTGGAAGGATGGTCTTGATTATCGTCATGGTACTGGTCATGGAATTGGGTCCTACCTGAATGTTCATGAAGGACCTCATTTAATCAGTTTTAGACCACAGGCTCGAAATGTACCATTGCAAGCTTCAATGACCGTCACAGATGAACCCGGTTACTATGAGGATGGAAATTTCGGGATAAGATTGGAGAATGTGCTTATCGTCAAGGAGGCTGGTACAAAGTTCAATTTTGGTGATAGAGGTTACCTAGCATTTGAACACATTACCTGGGCACCATTCCAAAGGAAGTTGATTGACTTGAGCCTTCTTATGCCTGATGAGATAGATTGGTTAAACTCTTATCATTCTAAATGTAGAGATATTCTGGCGCCGTACTTGGATGAAGCTGAAAATGCATGGCTGAAGAAAGCCACTGAACCTTTAAGTGTGTGA 1965 0.4316 MADTLSALRSSMASHSPPLDALVVPSEDYHQSEFVSARDMRREFLSGFTGSAGLALVTKNEALLWTDGRYFLQATQQLSDQWKLMRIGEDPTVDIWMADHTKGRPQPPSDYDHIISYVASKWSFVSCRSVADKLRDLREKLMQEKARGIIVTTLDEVAWLYNIRGSDVAYSPVVHAFAIVTSNSAFFYVDKRKLSVEVKTYLEDNGIEVKEYMAVSTDVVLLTSDELNAGAAVRGTPAEVTTEVKKSLSETDRRVNGNRQAEERSNDLIWADPGSCCYALYSTLSPDKVLLQQSPLALAKALKNQVELDGLRKAQIRDGAAVVQYLVWLDKKVLNDDALAWFDVQMQDSYGALGYFLEGHKANKENHFFHFAMDSREVPVGVTIVVSLAFGGLIDSTCYHTVQLIVWNMNNFRGLSFPTISAVGPNAAIIHYSPQAGTCADLDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSAHEKACYTAVLKGHIALGNARFPNGTNGQALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEAGTKFNFGDRGYLAFEHITWAPFQRKLIDLSLLMPDEIDWLNSYHSKCRDILAPYLDEAENAWLKKATEPLSV 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1494 654 Gene3D - 110 299 IPR029149 -
Glsi05g1494 654 FunFam Xaa-Pro aminopeptidase P 395 652 - -
Glsi05g1494 654 Pfam Creatinase/Prolidase N-terminal domain 126 307 - -
Glsi05g1494 654 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 521 533 IPR001131 -
Glsi05g1494 654 Pfam Metallopeptidase family M24 409 581 IPR000994 -
Glsi05g1494 654 Gene3D Creatinase/methionine aminopeptidase superfamily 301 654 IPR036005 -
Glsi05g1494 654 Coils Coil 127 147 - -
Glsi05g1494 654 Pfam Creatinase/Prolidase N-terminal domain 5 88 IPR000587 -
Glsi05g1494 654 Gene3D - 1 109 IPR029149 -
Glsi05g1494 654 SUPERFAMILY Creatinase/prolidase N-terminal domain 40 88 IPR029149 -
Glsi05g1494 654 PANTHER XAA-PRO AMINOPEPTIDASE 1 127 652 - -
Glsi05g1494 654 CDD APP 310 589 IPR033740 GO:0070006
Glsi05g1494 654 Pfam C-terminal region of peptidase_M24 593 652 IPR032416 -
Glsi05g1494 654 SUPERFAMILY Creatinase/aminopeptidase 306 618 IPR036005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1494 Glsi-ChrGlsi05 63563818 63572241 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1494 05 63563818 63572241 Glsi05g1494 05 63563818 63572241 ECH