Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1485 ATGCGTGGGTTTGTGTGGGCGTGGCAAGTTGATGTGGAGATTGGAACGGCAGAAGGTTTGTGAGCCACCTTAGCTAAGGCAAAACTCACACTGATCCAACTGGGACTTCTCTTCTGCACTTCCAACATCATGTTGATGATGGAACATCGCAAATCTTTCTTGGCGTCGCCATTTTCATTTCTCTTGTTCTTCTTTTTTATCCTTTCTTTGTACGGGAAGGCACTGAGTAACGGGGATGTCATAACAAGTGCGGGTCCTGTCGCGGAGAAACATCAGAGAAGGACAATAACTGTCACTGAATACGGAGAGGTCTCCGCTGTTGACATCCAAGATGGACACAGACCACCCTACCATCTTCAGTTTTTCACCCTGGATCCAAACTCTTTGTTTCTTCCTGTACTTCTCCATGCTGACATGGTCTTCTATGTTCAGACTGGGAGTGGAAGGCTGATTTGGGCAGATGAGGATGATACTAGAAGGATAAATCTACGTCAAGGAGACATATCCATGCTCAGAACAGGATCTGTTTTCTATTTACAGAGCAACTTGGAGGCAGAAAGACAGAAACTTAGGATTTTTGCACTTTTTGCCAATACGGATGATAACAACTACGACCCAGAAATTGGCGCTTATTCAAGAATCAATGATCTAGTTAGAGGCTTTGACAAGAAAATCATGCAAGCAGCTTTTAAGGTGCCGGAGAAACTGATTGAAGCAATTACAAACAAAACTGACACCCCCGCTATAGTGCATGCGGTTTCAAAGGAGAAAACTAATTTCTGGGAATTGGAGGCTTGGTTTCTAAAGAGTATATTAGGAGGCCAGGTTGGCATGTCACGGAACAGCAAGAAAGCCCAAACATATAACATCTTTGATAAAGATCCTGATTTCAAAAACTGTAATGGCTGGAGCCTCACAGTGACCAAAAAACAGTTTAAATCATTAAAGCATACCAACATTGGATTTCTGATGGTGAATTTGACTACGGGATCAATGATGGCGCCACATTGGAATCCAAGGGCAACCGAGATAGCAGTGGTACTGCAAGGGGAAGGCATGGTTCGAGTAGTATGTGGTAGCAGCAACATTGACAAGTCAAAATGCCAAAACATGAGGTTTAAGGTTAAGCAAGGAGATGTTTTTGTGGTTCCTAGGTTTCATCCAATGGCTCAGATGTCATTCAACAATGATTCACTTGTTTTTCTGGGGTTCAGCACGACAACGAAGAAAAGTTATCCTCAATTTCTAGCCGGAAAGAGATCAGTGCTACAAACTGTGGACAAACAGATATTGGCTACATCTTTCAATGTCGGCAACTCAACAATTGACCAGCTTTTGGCTTCTCAGGCTGATTCCATCATATTGGGGTGTGGATCCTGTGCGGAGGAAGAGGAAAGGATAATGAAAGAAGAAGCCAGAAAGAGAGAAGAGGAGAAAAAGAGAGAGGAGGAAGCCAGAAGGAGAGAAGAAGAGAAAAAGAGAGAGGAAGAAGCCAGGAGAGAAGAAGAGAAAAAGAGAGAGGAGGAAGCCAGGAGAGAAGAAGAGAAAAAGAGAGAGGAGGAAGCCAGAAGGAGAGAAGAGAAGAAAAAGAGAGAGGAGGAAGCCAGAAGGAGAGAAGAGAAGAAAAAAAGAGAGGAAGAAGCCAGGAGAGAAGAGGAGAAAAAGAGAGAGGAGGAAGCCAGAAGGAGAGAAGAGAAGAAAAAGAGGGAGGAGGAAGCCAGAAGGAGAGAAGAGGAGAAAAAGAGGGAGGAGGAAGCCAGAAGGAGGGAAGAGGAGAAAAGGAGAGAGGAAGAAAAGAGAAGAGAAGAAGAAGAAGAAGCAGCAGAAAGGGAGCAGGAAGAAAGAGCGGAGACAGAGCAAGAAGAGGCTAGGAAACAACAAGAAAGAAGAGAGAAGCGAAAGGAGAAGGAGAAAGCTAAACAAAGAAAAGAAGTGGAGGAAGAAGCTAGAAGGAGGGAGGAAGAAAAAGAGCGGAAGAGAGAAGACGAAAAAAAGAGAAGAGAAGAAGAAGAGCAAGCAAAAACAGAGCAGGAAGAACAAGCAGAGAGAGAGCAAGAAGAGGCCAGGAGACAACAAGAAAGAAGGGAGAAGCGAAAGAAGGAGGAGAAAGCTATACAAAGAAAAGAAGAGGAGGAAGAAGCTAGAAGGAAGGAGGCAGAAGAAGAGCGAAAGAGAGAAGAAGAAGAAGAAGCAAAAAGGGAGCAGGAAGAACAAGCAGAGAGAGAGCAAGAAGAGGCCAGAAGACAACAAGAAAAAAGGGAGAAGCGAAAGGAGAAGGAGAAAGCTAAACAAAGAAAAGAAGAGGAGGAAGAAGCTAGAAGGAGGGAGGCAGAAGAAGAGCAGAAGAGAGAGGAAGAGGAAAAGAGAAGAGAAGAAGAAGAACAAGCAGAAAGGGAGCAGGAAGAACAAGCACAAAGAGAGCAGGAAGAGGCTAGGAGACAACAAGGTAGAAGGGAGAAGCGAAAGGAGGAAGAAGCAGAAAAGAGTAGAAAAGAAGGGAGAGAAAGGGAGAGACGCCGAGAAGAGGAGGAAGAAGCAGAATGGGAGCAGGAACAAGCTAGAAGACAAGAAGAAGAGAGGGAAAGGAGGCGAGAAGATGAGGAAGCAGAACAGGAAAAGGAACAAGCTAGAAGAAAACAGGAAGAGAGGGAAAGGAGGCGAGAAGAAGCACAACAGGAGCAGGAACAAGCCAGAAGACAGGAGGAAGAGAGGGAAAGGAGGCAAGAAGAAGTAGAACGTGAGAAGGAGCAAGCTACAAGACAGCAGGAAGAGAGGGAAAGAAGGCGAGAAGAGGAAGAAGAAACAGAAGAACAAGCCAAAAGACAGAAAAAACACAGGGAGAGGAAGGAGAGAGAAGCAGAAAAGGAGCAGGAACTAGCTAGAAAACAACAGGAAAAGAGGGAAAGGAGGCGAGAAAAGGAAGACGAAGTCGAACAGGAGCAGGAAAAGGCAAGAAGACAACAGGAAGAGAGAGAAAGGAGGCGAGAAGAAGAAGAAAAAGAATGA 3006 0.4484 MRGFVWAWQVDVEIGTAEGLXATLAKAKLTLIQLGLLFCTSNIMLMMEHRKSFLASPFSFLLFFFFILSLYGKALSNGDVITSAGPVAEKHQRRTITVTEYGEVSAVDIQDGHRPPYHLQFFTLDPNSLFLPVLLHADMVFYVQTGSGRLIWADEDDTRRINLRQGDISMLRTGSVFYLQSNLEAERQKLRIFALFANTDDNNYDPEIGAYSRINDLVRGFDKKIMQAAFKVPEKLIEAITNKTDTPAIVHAVSKEKTNFWELEAWFLKSILGGQVGMSRNSKKAQTYNIFDKDPDFKNCNGWSLTVTKKQFKSLKHTNIGFLMVNLTTGSMMAPHWNPRATEIAVVLQGEGMVRVVCGSSNIDKSKCQNMRFKVKQGDVFVVPRFHPMAQMSFNNDSLVFLGFSTTTKKSYPQFLAGKRSVLQTVDKQILATSFNVGNSTIDQLLASQADSIILGCGSCAEEEERIMKEEARKREEEKKREEEARRREEEKKREEEARREEEKKREEEARREEEKKREEEARRREEKKKREEEARRREEKKKREEEARREEEKKREEEARRREEKKKREEEARRREEEKKREEEARRREEEKRREEEKRREEEEEAAEREQEERAETEQEEARKQQERREKRKEKEKAKQRKEVEEEARRREEEKERKREDEKKRREEEEQAKTEQEEQAEREQEEARRQQERREKRKKEEKAIQRKEEEEEARRKEAEEERKREEEEEAKREQEEQAEREQEEARRQQEKREKRKEKEKAKQRKEEEEEARRREAEEEQKREEEEKRREEEEQAEREQEEQAQREQEEARRQQGRREKRKEEEAEKSRKEGRERERRREEEEEAEWEQEQARRQEEERERRREDEEAEQEKEQARRKQEERERRREEAQQEQEQARRQEEERERRQEEVEREKEQATRQQEERERRREEEEETEEQAKRQKKHRERKEREAEKEQELARKQQEKRERRREKEDEVEQEQEKARRQQEERERRREEEEKE 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1485 1001 MobiDBLite consensus disorder prediction 664 761 - -
Glsi05g1485 1001 CDD cupin_7S_vicilin-like_N 99 257 - -
Glsi05g1485 1001 MobiDBLite consensus disorder prediction 785 826 - -
Glsi05g1485 1001 MobiDBLite consensus disorder prediction 607 633 - -
Glsi05g1485 1001 Gene3D Jelly Rolls 280 458 IPR014710 -
Glsi05g1485 1001 Gene3D Jelly Rolls 87 260 IPR014710 -
Glsi05g1485 1001 Pfam Cupin 288 441 IPR006045 -
Glsi05g1485 1001 MobiDBLite consensus disorder prediction 613 633 - -
Glsi05g1485 1001 Coils Coil 460 826 - -
Glsi05g1485 1001 Coils Coil 831 1001 - -
Glsi05g1485 1001 MobiDBLite consensus disorder prediction 859 973 - -
Glsi05g1485 1001 PANTHER OS03G0336100 PROTEIN-RELATED 59 460 - -
Glsi05g1485 1001 SMART Cupin_1_3 288 443 IPR006045 -
Glsi05g1485 1001 SMART Cupin_1_3 91 238 IPR006045 -
Glsi05g1485 1001 CDD cupin_7S_vicilin-like_C 295 452 - -
Glsi05g1485 1001 SUPERFAMILY RmlC-like cupins 114 450 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1485 Glsi-ChrGlsi05 63484369 63490303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1485 87 490 Miscellaneous Gene Families AT4G36700 45.863 1.18e-115 364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1485 05 63484369 63490303 Glsi05g1485 05 63484369 63490303 ECH